MDDOmics: multi-omics resource of major depressive disorder

被引:0
|
作者
Zhao, Yichao [1 ]
Xiang, Ju [2 ]
Shi, Xingyuan [1 ]
Jia, Pengzhen [1 ]
Zhang, Yan [3 ,4 ]
Li, Min [1 ]
机构
[1] Cent South Univ, Sch Comp Sci & Engn, 932 South Lushan Rd, Changsha 410083, Peoples R China
[2] Changsha Univ Sci & Technol, Sch Comp & Commun Engn, 45 Chiling Rd, Changsha 410114, Peoples R China
[3] Cent South Univ, Xiangya Hosp 2, Dept Psychiat, 139 Renmin Rd Cent, Changsha 410011, Peoples R China
[4] Cent South Univ, Xiangya Hosp 2, Natl Clin Res Ctr Mental Disorders, 139 Renmin Rd Cent, Changsha 410011, Peoples R China
关键词
GENE-EXPRESSION; DATABASE; REPOSITORY; DISEASE; HEALTH;
D O I
10.1093/database/baae042
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Major depressive disorder (MDD) is a pressing global health issue. Its pathogenesis remains elusive, but numerous studies have revealed its intricate associations with various biological factors. Consequently, there is an urgent need for a comprehensive multi-omics resource to help researchers in conducting multi-omics data analysis for MDD. To address this issue, we constructed the MDDOmics database (Major Depressive Disorder Omics, (https://www.csuligroup.com/MDDOmics/), which integrates an extensive collection of published multi-omics data related to MDD. The database contains 41 222 entries of MDD research results and several original datasets, including Single Nucleotide Polymorphisms, genes, non-coding RNAs, DNA methylations, metabolites and proteins, and offers various interfaces for searching and visualization. We also provide extensive downstream analyses of the collected MDD data, including differential analysis, enrichment analysis and disease-gene prediction. Moreover, the database also incorporates multi-omics data for bipolar disorder, schizophrenia and anxiety disorder, due to the challenge in differentiating MDD from similar psychiatric disorders. In conclusion, by leveraging the rich content and online interfaces from MDDOmics, researchers can conduct more comprehensive analyses of MDD and its similar disorders from various perspectives, thereby gaining a deeper understanding of potential MDD biomarkers and intricate disease pathogenesis.Database URL: https://www.csuligroup.com/MDDOmics/
引用
收藏
页数:10
相关论文
共 50 条
  • [21] Survey on Multi-omics, and Multi-omics Data Analysis, Integration and Application
    Shahrajabian, Mohamad Hesam
    Sun, Wenli
    CURRENT PHARMACEUTICAL ANALYSIS, 2023, 19 (04) : 267 - 281
  • [22] ProteomicsDB: a multi-omics and multi-organism resource for life science research
    Samaras, Patroklos
    Schmidt, Tobias
    Frejno, Martin
    Gessulat, Siegfried
    Reinecke, Maria
    Jarzab, Anna
    Zecha, Jana
    Mergner, Julia
    Giansanti, Piero
    Ehrlich, Hans-Christian
    Aiche, Stephan
    Rank, Johannes
    Kienegger, Harald
    Krcmar, Helmut
    Kuster, Bernhard
    Wilhelm, Mathias
    NUCLEIC ACIDS RESEARCH, 2020, 48 (D1) : D1153 - D1163
  • [23] Multi-omics profiling approaches to biomarker discovery in bipolar disorder
    Bahn, S.
    Alsaif, M.
    Rahmoune, H.
    EUROPEAN NEUROPSYCHOPHARMACOLOGY, 2012, 22 : S120 - S120
  • [24] Are multi-omics enough?
    Cristina Vilanova
    Manuel Porcar
    Nature Microbiology, 1 (8)
  • [25] Advances in multi-omics study of biomarkers of glycolipid metabolism disorder
    Fang, Xinyi
    Miao, Runyu
    Wei, Jiahua
    Wu, Haoran
    Tian, Jiaxing
    COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2022, 20 : 5935 - 5951
  • [26] Are multi-omics enough?
    Vilanova, Cristina
    Porcar, Manuel
    NATURE MICROBIOLOGY, 2016, 1 (08)
  • [27] CLINICAL MULTI-OMICS
    Radstake, Timothy R.
    ANNALS OF THE RHEUMATIC DISEASES, 2019, 78 : 16 - 16
  • [28] Goose multi-omics database: A comprehensive multi-omics database for goose genomics
    Huang, Mingjiang
    Sun, Jiahe
    Wang, Jian
    Ye, Xiaoli
    Chen, Zhuping
    Zhao, Xianzhi
    Zhang, Keshan
    Ma, Lin
    Xue, Jiajia
    Luo, Yi
    Wu, Xianwen
    Wang, Haiwei
    Wang, Chao
    Liu, Zuohua
    Xie, Youhui
    Chen, Ying
    Wang, Qigui
    Wang, Yi
    Gao, Guangliang
    POULTRY SCIENCE, 2025, 104 (03)
  • [29] CardioGenBase: A Literature Based Multi-Omics Database for Major Cardiovascular Diseases
    Alexandar, V
    Nayar, Pradeep G.
    Murugesan, R.
    Mary, Beaulah
    Darshana, P.
    Ahmed, Shiek S. S. J.
    PLOS ONE, 2015, 10 (12):
  • [30] A Multi-Omics Approach to Understanding ATP Utilization Deficits in Major Depression
    O'Donovan, Sinead
    Wu, Xiaojun
    Reigle, Jim
    Alnafisah, Rawan
    Alganem, Khaled
    Joyce, Alex
    McCullumsmith, Robert
    NEUROPSYCHOPHARMACOLOGY, 2021, 46 (SUPPL 1) : 246 - 246