Sparse Blind Spherical Deconvolution of diffusion weighted MRI

被引:0
|
作者
Fuchs, Clement [1 ]
Dessain, Quentin [1 ,2 ]
Delinte, Nicolas [1 ,2 ]
Dausort, Manon [1 ]
Macq, Benoit [1 ]
机构
[1] UCLouvain, Inst Informat & Commun Technol Elect & Appl Math I, Louvain La Neuve, Belgium
[2] UCLouvain, Inst Neurosci, Brussels, Belgium
关键词
diffusion MRI; spherical deconvolution; white matter; microstructure; multi-fascicle models; MICROSTRUCTURE; DENSITY; ROBUST; QUANTIFICATION; COEFFICIENTS; FRAMEWORK;
D O I
10.3389/fnins.2024.1385975
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Diffusion-weighted magnetic resonance imaging provides invaluable insights into in-vivo neurological pathways. However, accurate and robust characterization of white matter fibers microstructure remains challenging. Widely used spherical deconvolution algorithms retrieve the fiber Orientation Distribution Function (ODF) by using an estimation of a response function, i.e., the signal arising from individual fascicles within a voxel. In this paper, an algorithm of blind spherical deconvolution is proposed, which only assumes the axial symmetry of the response function instead of its exact knowledge. This algorithm provides a method for estimating the peaks of the ODF in a voxel without any explicit response function, as well as a method for estimating signals associated with the peaks of the ODF, regardless of how those peaks were obtained. The two stages of the algorithm are tested on Monte Carlo simulations, as well as compared to state-of-the-art methods on real in-vivo data for the orientation retrieval task. Although the proposed algorithm was shown to attain lower angular errors than the state-of-the-art constrained spherical deconvolution algorithm on synthetic data, it was outperformed by state-of-the-art spherical deconvolution algorithms on in-vivo data. In conjunction with state-of-the art methods for axon bundles direction estimation, the proposed method showed its potential for the derivation of per-voxel per-direction metrics on synthetic as well as in-vivo data.
引用
收藏
页数:17
相关论文
共 50 条
  • [31] The effect of gradient nonlinearities on fiber orientation estimates from spherical deconvolution of diffusion magnetic resonance imaging data
    Guo, Fenghua
    de Luca, Alberto
    Parker, Greg
    Jones, Derek K.
    Viergever, Max A.
    Leemans, Alexander
    Tax, Chantal M. W.
    HUMAN BRAIN MAPPING, 2021, 42 (02) : 367 - 383
  • [32] Neurite density imaging versus imaging of microscopic anisotropy in diffusion MRI: A model comparison using spherical tensor encoding
    Lampinen, Bjorn
    Szczepankiewicz, Filip
    Martensson, Johan
    van Westen, Danielle
    Sundgren, Pia C.
    Nilsson, Markus
    NEUROIMAGE, 2017, 147 : 517 - 531
  • [33] Quantitative Comparison of Spherical Deconvolution Approaches to Resolve Complex Fiber Configurations in Diffusion MRI: ISRA-Based vs L2L0 Sparse Methods
    Mastropietro, Alfonso
    Scifo, Paola
    Rizzo, Giovanna
    IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, 2017, 64 (12) : 2847 - 2857
  • [34] Non-Negative Spherical Deconvolution (NNSD) for estimation of fiber Orientation Distribution Function in single-/multi-shell diffusion MRI
    Cheng, Jian
    Deriche, Rachid
    Jiang, Tianzi
    Shen, Dinggang
    Yap, Pew-Thian
    NEUROIMAGE, 2014, 101 : 750 - 764
  • [35] Resolving degeneracy in diffusion MRI biophysical model parameter estimation using double diffusion encoding
    Coelho, Santiago
    Pozo, Jose M.
    Jespersen, Sune N.
    Jones, Derek K.
    Frangi, Alejandro F.
    MAGNETIC RESONANCE IN MEDICINE, 2019, 82 (01) : 395 - 410
  • [36] Spherical deconvolution with tissue-specific response functions and multi-shell diffusion MRI to estimate multiple fiber orientation distributions (mFODs)
    De Luca, Alberto
    Guo, Fenghua
    Froeling, Martijn
    Leemans, Alexander
    NEUROIMAGE, 2020, 222
  • [37] A microstructure estimation Transformer inspired by sparse representation for diffusion MRI
    Zheng, Tianshu
    Yan, Guohui
    Li, Haotian
    Zheng, Weihao
    Shi, Wen
    Zhang, Yi
    Ye, Chuyang
    Wu, Dan
    MEDICAL IMAGE ANALYSIS, 2023, 86
  • [38] Spatial profiling of in vivo diffusion-weighted MRI parameters in the healthy human kidney
    Gilani, Nima
    Mikheev, Artem
    Brinkmann, Inge M.
    Kumbella, Malika
    Babb, James S.
    Basukala, Dibash
    Wetscherek, Andreas
    Benkert, Thomas
    Chandarana, Hersh
    Sigmund, Eric E.
    MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE, 2024, 37 (04) : 671 - 680
  • [39] Towards higher sensitivity and stability of axon diameter estimation with diffusion-weighted MRI
    Sepehrband, Farshid
    Alexander, Daniel C.
    Kurniawan, Nyoman D.
    Reutens, David C.
    Yang, Zhengyi
    NMR IN BIOMEDICINE, 2016, 29 (03) : 293 - 308
  • [40] VARIATIONAL DENOISING OF DIFFUSION WEIGHTED MRI
    McGraw, Tim
    Vemuri, Baba
    Oezarslan, Evren
    Chen, Yunmei
    Mareci, Thomas
    INVERSE PROBLEMS AND IMAGING, 2009, 3 (04) : 625 - 648