Prognostic value and gene regulatory network of CMSS1 in hepatocellular carcinoma

被引:4
作者
Chen, Cheng [1 ]
Wang, Caiming [1 ,2 ]
Liu, Wei [1 ,3 ]
Chen, Jiacheng [1 ]
Chen, Liang [1 ]
Luo, Xiangxiang [1 ]
Wu, Jincai [1 ]
机构
[1] Hainan Med Univ, Hainan Gen Hosp, Hainan Affiliated Hosp, Dept Hepatobiliary & Pancreat Surg, 19 Xiuhua Rd, Haikou 570311, Hainan, Peoples R China
[2] Hainan Med Univ, Hainan Gen Hosp, Hainan Affiliated Hosp, Dept Operat Room, Haikou, Hainan, Peoples R China
[3] Jinan Univ, Guangzhou Red Cross Hosp, Dept Breast, Guangzhou, Guangdong, Peoples R China
基金
海南省自然科学基金;
关键词
CMSS1; hepatocellular carcinoma; bioinformatics; diagnosis; prognosis; CANCER; EXPRESSION;
D O I
10.3233/CBM-230209
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
BACKGROUND: Cms1 ribosomal small subunit homolog (CMSS1) is an RNA-binding protein that may play an important role in tumorigenesis and development.OBJECTIVE: RNA-seq data from the GEPIA database and the UALCAN database were used to analyze the expression of CMSS1 in liver hepatocellular carcinoma (LIHC) and its relationship with the clinicopathological features of the patients.METHODS: LinkedOmics was used to identify genes associated with CMSS1 expression and to identify miRNAs and transcription factors significantly associated with CMSS1 by GSEA.RESULTS: The expression level of CMSS1 in hepatocellular carcinoma tissues was significantly higher than that in normal tissues. In addition, the expression level of CMSS1 in advanced tumors was significantly higher than that in early tumors. The expression level of CMSS1 was higher in TP53-mutated tumors than in non-TP53-mutated tumors. CMSS1 expression levels were strongly correlated with disease-free survival (DFS) and overall survival (OS) in patients with LIHC, and high CMSS1 expression predicted poorer OS ( P < 0.01) and DFS ( P < 0.01). Meanwhile, our results suggested that CMSS1 is associated with the composition of the immune microenvironment of LIHC.CONCLUSIONS: The present study suggests that CMSS1 is a potential molecular marker for the diagnosis and prognostic of LIHC.
引用
收藏
页码:361 / 370
页数:10
相关论文
共 29 条
[1]   The Autophagy-RNA Interplay: Degradation and Beyond [J].
Abildgaard, Marie H. ;
Brynjolfsdottir, Solveig H. ;
Frankel, Lisa B. .
TRENDS IN BIOCHEMICAL SCIENCES, 2020, 45 (10) :845-857
[2]   Development of a nomogram to predict outcome after liver resection for hepatocellular carcinoma in Child-Pugh B cirrhosis [J].
Berardi, Giammauro ;
Morise, Zenichi ;
Sposito, Carlo ;
Igarashi, Kazuharu ;
Panetta, Valentina ;
Simonelli, Ilaria ;
Kim, Sungho ;
Goh, Brian K. P. ;
Kubo, Shoji ;
Tanaka, Shogo ;
Takeda, Yutaka ;
Ettorre, Giuseppe Maria ;
Wilson, Gregory C. ;
Cimino, Matteo ;
Chan, Chung-Yip ;
Torzilli, Guido ;
Cheung, Tan To ;
Kaneko, Hironori ;
Mazzaferro, Vincenzo ;
Geller, David A. ;
Han, Ho-Seong ;
Kanazawa, Akishige ;
Wakabayashi, Go ;
Troisi, Roberto Ivan .
JOURNAL OF HEPATOLOGY, 2020, 72 (01) :75-84
[3]   RNA-binding protein QKI suppresses breast cancer via RASA1/MAPK signaling pathway [J].
Cao, Yun ;
Chu, Chengyu ;
Li, Xiaoyan ;
Gu, Siwen ;
Zou, Qiang ;
Jin, Yiting .
ANNALS OF TRANSLATIONAL MEDICINE, 2021, 9 (02)
[4]   UALCAN: A Portal for Facilitating Tumor Subgroup Gene Expression and Survival Analyses [J].
Chandrashekar, Darshan S. ;
Bashel, Bhuwan ;
Balasubramanya, Sai Akshaya Hodigere ;
Creighton, Chad J. ;
Ponce-Rodriguez, Israel ;
Chakravarthi, Balabhadrapatruni V. S. K. ;
Varambally, Sooryanarayana .
NEOPLASIA, 2017, 19 (08) :649-658
[5]   Silencing of RNA binding protein, ZFP36L1, promotes epithelial-mesenchymal transition in liver cancer cells by regulating transcription factor ZEB2 [J].
Chen, Jian ;
Patial, Sonika ;
Saini, Yogesh .
CELLULAR SIGNALLING, 2022, 100
[6]  
De Conti L., 2017, Wiley Interdiscip Rev RNA, V8, P1394
[7]   Inhibition of YTHDF2 triggers proteotoxic cell death in MYC-driven breast cancer [J].
Einstein, Jaclyn M. ;
Perelis, Mark ;
Chaim, Isaac A. ;
Meena, Jitendra K. ;
Nussbacher, Julia K. ;
Tankka, Alexandra T. ;
Yee, Brian A. ;
Li, Heyuan ;
Madrigal, Assael A. ;
Neill, Nicholas J. ;
Shankar, Archana ;
Tyagi, Siddhartha ;
Westbrook, Thomas F. ;
Yeo, Gene W. .
MOLECULAR CELL, 2021, 81 (15) :3048-+
[8]   RNA-Binding Proteins in Cancer: Functional and Therapeutic Perspectives [J].
Kang, Donghee ;
Lee, Yerim ;
Lee, Jae-Seon .
CANCERS, 2020, 12 (09) :1-33
[9]   Radiofrequency ablation vs. surgery for perivascular hepatocellular carcinoma: Propensity score analyses of long-term outcomes [J].
Lee, Sunyoung ;
Kang, Tae Wook ;
Cha, Dong Ik ;
Song, Kyoung Doo ;
Lee, Min Woo ;
Rhim, Hyunchul ;
Lim, Hyo Keun ;
Sinn, Dong Hyun ;
Kim, Jong Man ;
Kim, Kyunga .
JOURNAL OF HEPATOLOGY, 2018, 69 (01) :70-78
[10]   Exosomal miRNAs in hepatocellular carcinoma development and clinical responses [J].
Li, Shuangshuang ;
Yao, Jiping ;
Xie, Mingjie ;
Liu, Yanning ;
Zheng, Min .
JOURNAL OF HEMATOLOGY & ONCOLOGY, 2018, 11