Evolutionary History of Oncogenes and Tumor Suppressor Genes Families: The Ancestral Origin in Mammals and Duplication Patterns

被引:0
作者
Nawaz, Yasir [1 ]
Khan, Ali Zaib [1 ]
Tanvir, Fouzia [1 ]
Ambreen, Sadaf [2 ]
Zafar, Javaria [1 ]
Umar, Asma [3 ]
Majeed, Imran [4 ]
Tariq, Hamna [5 ]
机构
[1] Univ Okara, Fac Life Sci, Dept Zool, Okara, Pakistan
[2] Univ Okara, Fac Life Sci, Dept Bioinformat, Okara, Pakistan
[3] Allama Iqbal Med Coll, Dept Biochem, Lahore, Pakistan
[4] Jinnah Hosp Lahore, Dept Radiat Oncol, Lahore, Pakistan
[5] Univ Okara, Fac Life Sci, Dept Mol Biol, Okara, Pakistan
关键词
Oncogenes; tumor suppressor genes; breast cancer; phylogenetic analysis; peto's paradox; paralogues; CANCER RESISTANCE; MODEL; DNA; CONSEQUENCES;
D O I
10.2174/1570180820666230227114821
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Background Cancer is a condition that involves the irregular progression of cells with the capacity to enter and move to other portions of the body. Peto's paradox shows there is no relation between large body size and cancer risk.Objective To assess the phylogenetic analysis of oncogenes and tumor suppressor genes of breast cancer.Methods Data was collected from the ensemble genome browser and NCBI. A BLAST search was done, and FASTA sequences were collected. MEGA X version 5 software was used for phylogenetic analysis. Alignment was made by Clustal W, and two trees were constructed as a neighbor-joining tree and maximum likelihood trees as vertical and circular. The accuracy was confirmed by the bootstrap method (at 500 pseudoreplicates).Results The results show that there were 9 copies of the tp53 gene in elephants are present due to which elephants have less chance of getting cancer. This proves that Peto's paradox is true. The evolutionary study of genes set, present on the FGFR-bearing chromosomes, i.e., Hsa1 to Hsa4, Hsa6 to Has 9, Hsa11 to Hsa14, Hsa17, Hsa18, Hsa21, Hsa22, and HsaX. The phylogenetic trees of 10 gene families, including 4 genes from tumor suppressor genes and 6 genes from oncogenes, were generated with vertebrate sequences.Conclusion Higher animals have less chance to develop cancer because of huge body mass and longevity and increased number of genes in their body. Different oncogenes and tumor suppressor genes are associated with different species. All genes have two or more paralogues except BRCA, CHECK, MEN, NUP, and SUFU genes.
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页码:1226 / 1239
页数:14
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