Development and internal validation of a clinical risk score to predict incident renal and pulmonary tumours in people with tuberous sclerosis complex

被引:0
作者
Loubert, Frederic [1 ]
House, Andrew A. [2 ]
Larochelle, Catherine [3 ,4 ]
Major, Philippe [5 ]
Keezer, Mark R. [1 ,4 ]
机构
[1] CRCHUM, Montreal, PQ H2X 0C1, Canada
[2] London Hlth Sci Ctr, London, ON, Canada
[3] Univ Montreal, Montreal, PQ, Canada
[4] Univ Montreal, Dept Neurosci, Montreal, PQ, Canada
[5] Ctr Hosp Univ St Justine, Res Ctr, Montreal, PQ, Canada
关键词
Prognosis; MODELS; ANGIOMYOLIPOMA; IMPUTATION; PROGNOSIS;
D O I
10.1136/jmg-2023-109717
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Objective This study aims to develop and internally validate a clinical risk score to predict incident renal angiomyolipoma (AML) and pulmonary lymphangioleiomyomatosis (LAM) in people with tuberous sclerosis complex (TSC).Study design Data from 2420 participants in the TSC Alliance Natural History Database were leveraged for these analyses. Logistic regression was used to predict AML and LAM development using 10 early-onset clinical manifestations of TSC as potential predictors, in addition to sex and genetic mutation. For our models, we divided AML into three separate outcomes: presence or absence of AML, unilateral or bilateral and whether any are >= 3 cm in diameter. The resulting regression models were turned into clinical risk scores which were then internally validated using bootstrap resampling, measuring discrimination and calibration.Results The lowest clinical risk scores predicted a risk of AML and LAM of 1% and 0%, while the highest scores predicted a risk of 99% and 73%, respectively. Calibration was excellent for all three AML outcomes and good for LAM. Discrimination ranged from good to strong. C-statistics of 0.84, 0.83, 0.83 and 0.92 were seen for AML, bilateral AML, AML with a lesion >= 3 cm and LAM, respectively.Conclusion Our work is an important step towards identifying individuals who could benefit from preventative strategies as well as more versus less frequent screening imaging. We expect that our work will allow for more personalised medicine in people with TSC. External validation of the risk scores will be important to confirm the robustness of our findings.
引用
收藏
页码:943 / 949
页数:7
相关论文
共 27 条
  • [1] [Anonymous], 2022, RMS REGRESSION MODEL
  • [2] [Anonymous], 2023, R PACKAGE VERSION 3
  • [3] Everolimus for angiomyolipoma associated with tuberous sclerosis complex or sporadic lymphangioleiomyomatosis (EXIST-2): a multicentre, randomised, double-blind, placebo-controlled trial
    Bissler, John J.
    Kingswood, J. Christopher
    Radzikowska, Elzbieta
    Zonnenberg, Bernard A.
    Frost, Michael
    Belousova, Elena
    Sauter, Matthias
    Nonomura, Norio
    Brakemeier, Susanne
    de Vries, Petrus J.
    Whittemore, Vicky H.
    Chen, David
    Sahmoud, Tarek
    Shah, Gaurav
    Lincy, Jeremie
    Lebwohl, David
    Budde, Klemens
    [J]. LANCET, 2013, 381 (9869) : 817 - 824
  • [4] Guide to presenting clinical prediction models for use in clinical settings
    Bonnett, Laura J.
    Snell, Kym I. E.
    Collins, Gary S.
    Riley, Richard D.
    [J]. BMJ-BRITISH MEDICAL JOURNAL, 2019, 365
  • [5] Collins GS, 2015, J CLIN EPIDEMIOL, V68, P112, DOI [10.1016/j.jclinepi.2014.11.010, 10.1186/s12916-014-0241-z, 10.1002/bjs.9736, 10.1038/bjc.2014.639, 10.1016/j.eururo.2014.11.025, 10.7326/M14-0697, 10.7326/M14-0698, 10.1136/bmj.g7594]
  • [6] Lymphangioleiomyomatosis Screening in Women With Tuberous Sclerosis
    Cudzilo, Corey J.
    Szczesniak, Rhonda D.
    Brody, Alan S.
    Rattan, Mantosh S.
    Krueger, Darcy A.
    Bissler, John J.
    Franz, David N.
    McCormack, Francis X.
    Young, Lisa R.
    [J]. CHEST, 2013, 144 (02) : 578 - 585
  • [7] Regularization Paths for Generalized Linear Models via Coordinate Descent
    Friedman, Jerome
    Hastie, Trevor
    Tibshirani, Rob
    [J]. JOURNAL OF STATISTICAL SOFTWARE, 2010, 33 (01): : 1 - 22
  • [8] Tuberous sclerosis complex
    Henske, Elizabeth P.
    Jozwiak, Sergiusz
    Kingswood, J. Christopher
    Sampson, Julian R.
    Thiele, Elizabeth A.
    [J]. NATURE REVIEWS DISEASE PRIMERS, 2016, 2
  • [9] Hosmer DW Jr, 2013, WILEY SER PROBAB ST, P89
  • [10] TuberOus SClerosis registry to increase disease Awareness (TOSCA) - baseline data on 2093 patients
    Kingswood, John C.
    d'Augeres, Guillaume B.
    Belousova, Elena
    Ferreira, Jose C.
    Carter, Tom
    Castellana, Ramon
    Cottin, Vincent
    Curatolo, Paolo
    Dahlin, Maria
    de Vries, Petrus J.
    Feucht, Martha
    Fladrowski, Carla
    Gislimberti, Gabriella
    Hertzberg, Christoph
    Jozwiak, Sergiusz
    Lawson, John A.
    Macaya, Alfons
    Nabbout, Rima
    O'Callaghan, Finbar
    Benedik, Mirjana P.
    Qin, Jiong
    Marques, Ruben
    Sander, Valentin
    Sauter, Matthias
    Takahashi, Yukitoshi
    Touraine, Renaud
    Youroukos, Sotiris
    Zonnenberg, Bernard
    Jansen, Anna C.
    [J]. ORPHANET JOURNAL OF RARE DISEASES, 2017, 12