Involvement of FAM170B-AS1, hsa-miR-1202, and hsa-miR-146a-5p in breast cancer

被引:0
|
作者
Abd ELhafeez, Ahmed Saeed [1 ]
Ghane, Hala Mostafa [1 ]
Swellam, Menha [2 ,3 ]
Taha, AlShaimaa Mohamed [1 ]
机构
[1] Ain Shams Univ, Dept Biochem, Fac Sci, Cairo, Egypt
[2] Natl Res Ctr, Biotechnol Res Inst, Dept Biochem, Giza, Egypt
[3] Natl Res Ctr, Cent Labs Network & Centers Excellence, High Throughput Mol & Genet Iaboratory, Giza, Egypt
关键词
Bioinformatics; diagnostic; EGFR; KRAS; risk factor; GROWTH-FACTOR RECEPTOR; DIFFERENT MOLECULAR SUBTYPES; LONG NONCODING RNAS; CELL LUNG-CANCER; PROGNOSTIC VALUE; DOWN-REGULATION; SERUM-LEVELS; EXPRESSION; MICRORNAS; MIR-146A;
D O I
10.3233/CBM-230396
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
BACKGROUND: FAM170B-AS1 is usually expressed low in all organs except for testicular tissues. No study was performed to explore its role in breast cancer (BC). Contradictory results were reported about hsa-miR-1202 and hsa-miR-146a-5p in BC. OBJECTIVE: The present study aimed to explore the involvement of FAM170B-AS1 in BC using bioinformatics predictive tools, followed by a practical validation besides exploring the impact of hsa-miR-1202 and hsa-miR-146a-5p in BC. METHODS: This study enrolled 96 female patients with BC, 30 patients with benign breast diseases (BBD), and 25 control subjects. The expressions of circulating FAM170B-AS1, hsa-miR-1202, and hsa-miR-146a-5p were quantified using qRT-PCR. These ncRNAs' associations, predictive, and diagnostic roles in BC were statistically tested. The underlying miRNA/mRNA targets of FAM170B-AS1 in BC were bioinformatically predicted followed by confirmation based on the GEPIA and TCGA databases. RESULTS: The expression of FAM170B-AS1 was upregulated in sera of BC patients and hsa-miR-1202 was upregulated in sera of BBD and BC patients while that of hsa-miR-146a-5p was downregulated in BC. These FAM170B-AS1 was significantly associated with BC when compared to BBD. FAM170B-AS1 and hsa-miR-1202 were statistically associated with the BC's stage, grade, and LN metastasis. FAM170B-AS1 and hsa-miR-146a-5p gave the highest specificity and sensitivity for BC. KRAS and EGFR were predicted to be targeted by FAM170B-AS1 through interaction with hsa-miR-143-3p and hsa-miR-7-5p, respectively. Based on the TCGA database, cancer patients having mutations in FAM170B show good overall survival. CONCLUSIONS: The present study reported that for the first time, FAM170B-AS1 may be a potential risk factor, predictive, and diagnostic marker for BC. In addition, FAM170B-AS1 might be involved in BC by interacting with hsa-miR-143-3p/KRAS and hsa-miR-7-5p/EGFR through enhancement or repression that may present a new therapeutic option for BC.
引用
收藏
页码:313 / 333
页数:21
相关论文
共 50 条
  • [21] hsa-miR-3177-5p and hsa-miR-3178 Inhibit 5-HT1A Expression by Binding the 3′-UTR Region in vitro
    Wu, Xue
    Ding, Mei
    Liu, Yi
    Xia, Xi
    Xu, Feng-ling
    Yao, Jun
    Wang, Bao-jie
    FRONTIERS IN MOLECULAR NEUROSCIENCE, 2019, 12
  • [22] hsa-miR-518-5p/hsa-miR-3135b Regulates the REL/SOD2 Pathway in Ischemic Cerebral Infarction
    Zhao, Boyan
    Jiang, Xiaofan
    FRONTIERS IN NEUROLOGY, 2022, 13
  • [23] MicroRNA expression patterns in oral squamous cell carcinoma: hsa-mir-99b-3p and hsa-mir-100-5p as novel prognostic markers for oral cancer
    Jakob, Mark
    Mattes, Lena M.
    Kueffer, Stefan
    Unger, Kristian
    Hess, Julia
    Bertlich, Mattis
    Haubner, Frank
    Ihler, Friedrich
    Canis, Martin
    Weiss, Bernhard G.
    Kitz, Julia
    HEAD AND NECK-JOURNAL FOR THE SCIENCES AND SPECIALTIES OF THE HEAD AND NECK, 2019, 41 (10): : 3499 - 3515
  • [24] The hsa-miR-516a-5p and hsa-miR-516b-5p microRNAs reduce the migration and invasion on T98G glioblastoma cell line
    Fonseca, Angela Y. Garcia
    Gonzalez-Giraldo, Yeimy
    Santos, Jannet Gonzalez
    Aristizabal-Pachon, Andres F.
    CANCER GENETICS, 2023, 270 : 12 - 21
  • [26] Hsa-miR-181a-5p Expression and Effects on Cell Proliferation in Gastric Cancer
    Chen, Gang
    Shen, Zhi-Li
    Wang, Ling
    Lv, Chun-Ye
    Huang, Xin-En
    Zhou, Rong-Ping
    ASIAN PACIFIC JOURNAL OF CANCER PREVENTION, 2013, 14 (06) : 3871 - 3875
  • [27] MicroRNA Biomarker hsa-miR-195-5p for Detecting the Risk of Lung Cancer
    Li, Lei
    Feng, Tienan
    Zhang, Weituo
    Gao, Sumeng
    Wang, Ruoyang
    Lv, Wenwen
    Zhu, Tengteng
    Yu, Herbert
    Qian, Biyun
    INTERNATIONAL JOURNAL OF GENOMICS, 2020, 2020
  • [28] Hsa_circFOXP1 Contributes to Breast Cancer Progression through Regulating miR-338-3p
    Wu, Kaiding
    Cheng, Kunkun
    CLINICAL AND EXPERIMENTAL OBSTETRICS & GYNECOLOGY, 2024, 51 (05)
  • [29] hsa-miR-33-5p as a Therapeutic Target Promotes Apoptosis of Breast Cancer Cells via Selenoprotein T
    Zhuang, Wei
    Liu, Jianhui
    Li, Wenjin
    FRONTIERS IN MEDICINE, 2021, 8
  • [30] Hsa-miR-125a-3p and hsa-miR-125a-5p are downregulated in non-small cell lung cancer and have inverse effects on invasion and migration of lung cancer cells
    Jiang, Lili
    Huang, Qin
    Zhang, Siyang
    Zhang, Qingfu
    Chang, Jihong
    Qiu, Xueshan
    Wang, Enhua
    BMC CANCER, 2010, 10