Involvement of FAM170B-AS1, hsa-miR-1202, and hsa-miR-146a-5p in breast cancer

被引:0
|
作者
Abd ELhafeez, Ahmed Saeed [1 ]
Ghane, Hala Mostafa [1 ]
Swellam, Menha [2 ,3 ]
Taha, AlShaimaa Mohamed [1 ]
机构
[1] Ain Shams Univ, Dept Biochem, Fac Sci, Cairo, Egypt
[2] Natl Res Ctr, Biotechnol Res Inst, Dept Biochem, Giza, Egypt
[3] Natl Res Ctr, Cent Labs Network & Centers Excellence, High Throughput Mol & Genet Iaboratory, Giza, Egypt
关键词
Bioinformatics; diagnostic; EGFR; KRAS; risk factor; GROWTH-FACTOR RECEPTOR; DIFFERENT MOLECULAR SUBTYPES; LONG NONCODING RNAS; CELL LUNG-CANCER; PROGNOSTIC VALUE; DOWN-REGULATION; SERUM-LEVELS; EXPRESSION; MICRORNAS; MIR-146A;
D O I
10.3233/CBM-230396
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
BACKGROUND: FAM170B-AS1 is usually expressed low in all organs except for testicular tissues. No study was performed to explore its role in breast cancer (BC). Contradictory results were reported about hsa-miR-1202 and hsa-miR-146a-5p in BC. OBJECTIVE: The present study aimed to explore the involvement of FAM170B-AS1 in BC using bioinformatics predictive tools, followed by a practical validation besides exploring the impact of hsa-miR-1202 and hsa-miR-146a-5p in BC. METHODS: This study enrolled 96 female patients with BC, 30 patients with benign breast diseases (BBD), and 25 control subjects. The expressions of circulating FAM170B-AS1, hsa-miR-1202, and hsa-miR-146a-5p were quantified using qRT-PCR. These ncRNAs' associations, predictive, and diagnostic roles in BC were statistically tested. The underlying miRNA/mRNA targets of FAM170B-AS1 in BC were bioinformatically predicted followed by confirmation based on the GEPIA and TCGA databases. RESULTS: The expression of FAM170B-AS1 was upregulated in sera of BC patients and hsa-miR-1202 was upregulated in sera of BBD and BC patients while that of hsa-miR-146a-5p was downregulated in BC. These FAM170B-AS1 was significantly associated with BC when compared to BBD. FAM170B-AS1 and hsa-miR-1202 were statistically associated with the BC's stage, grade, and LN metastasis. FAM170B-AS1 and hsa-miR-146a-5p gave the highest specificity and sensitivity for BC. KRAS and EGFR were predicted to be targeted by FAM170B-AS1 through interaction with hsa-miR-143-3p and hsa-miR-7-5p, respectively. Based on the TCGA database, cancer patients having mutations in FAM170B show good overall survival. CONCLUSIONS: The present study reported that for the first time, FAM170B-AS1 may be a potential risk factor, predictive, and diagnostic marker for BC. In addition, FAM170B-AS1 might be involved in BC by interacting with hsa-miR-143-3p/KRAS and hsa-miR-7-5p/EGFR through enhancement or repression that may present a new therapeutic option for BC.
引用
收藏
页码:313 / 333
页数:21
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