Exploring GPCR conformational dynamics using single-molecule fluorescence

被引:0
|
作者
Agyemang, Eugene [1 ]
Gonneville, Alyssa N. [2 ]
Tiruvadi-Krishnan, Sriram [2 ]
Lamichhane, Rajan [1 ,2 ]
机构
[1] Univ Tennessee, UT ORNL Grad Sch Genome Sci & Technol, Knoxville, TN 37996 USA
[2] Univ Tennessee, Dept Biochem & Cellular & Mol Biol, Knoxville, TN 37996 USA
基金
美国国家卫生研究院;
关键词
GPCR dynamics; Single; -molecule; TIRF microscopy; FRET; Nanodiscs; Co; -polymers; PROTEIN-COUPLED RECEPTOR; SITE-SPECIFIC INCORPORATION; HISTAMINE H-1 RECEPTOR; MEMBRANE-PROTEINS; CRYSTAL-STRUCTURE; HETEROLOGOUS EXPRESSION; STRUCTURAL INSIGHTS; LIGAND EFFICACY; PICHIA-PASTORIS; NUCLEIC ACID;
D O I
10.1016/j.ymeth.2024.03.011
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
G protein-coupled receptors (GPCRs) are membrane proteins that transmit specific external stimuli into cells by changing their conformation. This conformational change allows them to couple and activate G-proteins to initiate signal transduction. A critical challenge in studying and inferring these structural dynamics arises from the complexity of the cellular environment, including the presence of various endogenous factors. Due to the recent advances in cell-expression systems, membrane-protein purification techniques, and labeling approaches, it is now possible to study the structural dynamics of GPCRs at a single-molecule level both in vitro and in live cells. In this review, we discuss state-of-the-art techniques and strategies for expressing, purifying, and labeling GPCRs in the context of single-molecule research. We also highlight four recent studies that demonstrate the applications of single-molecule microscopy in revealing the dynamics of GPCRs. These techniques are also useful as complementary methods to verify the results obtained from other structural biology tools like cryo-electron microscopy and x-ray crystallography.
引用
收藏
页码:35 / 48
页数:14
相关论文
共 50 条
  • [41] Click Strategies for Single-Molecule Protein Fluorescence
    Milles, Sigrid
    Tyagi, Swati
    Banterle, Niccolo
    Koehler, Christine
    VanDelinder, Virginia
    Plass, Tilman
    Neal, Adrian P.
    Lemke, Edward A.
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2012, 134 (11) : 5187 - 5195
  • [42] Capturing reaction paths and intermediates in Cre-loxP recombination using single-molecule fluorescence
    Pinkney, Justin N. M.
    Zawadzki, Pawel
    Mazuryk, Jaroslaw
    Arciszewska, Lidia K.
    Sherratt, David J.
    Kapanidis, Achillefs N.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (51) : 20871 - 20876
  • [43] Use of single-molecule time-series data for refining conformational dynamics in molecular simulations
    Matsunaga, Yasuhiro
    Sugita, Yuji
    CURRENT OPINION IN STRUCTURAL BIOLOGY, 2020, 61 : 153 - 159
  • [44] Conformational Plasticity and Dynamics in the Generic Protein Folding Catalyst SlyD Unraveled by Single-Molecule FRET
    Kahra, Dana
    Kovermann, Michael
    Low, Christian
    Hirschfeld, Verena
    Haupt, Caroline
    Balbach, Jochen
    Huebner, Christian Gerhard
    JOURNAL OF MOLECULAR BIOLOGY, 2011, 411 (04) : 781 - 790
  • [45] Decoding the Structural Dynamics and Conformational Alternations of DNA Secondary Structures by Single-Molecule FRET Microspectroscopy
    Bandyopadhyay, Debolina
    Mishra, Padmaja P.
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2021, 8
  • [47] Life under the Microscope: Single-Molecule Fluorescence Highlights the RNA World
    Ray, Sujay
    Widom, Julia R.
    Walter, Nils G.
    CHEMICAL REVIEWS, 2018, 118 (08) : 4120 - 4155
  • [48] Kinetics coming into focus: single-molecule microscopy of riboswitch dynamics
    Ray, Sujay
    Chauvier, Adrien
    Walter, Nils G.
    RNA BIOLOGY, 2019, 16 (09) : 1077 - 1085
  • [49] High-throughput single-molecule fluorescence spectroscopy using parallel detection
    Michalet, X.
    Colyer, R. A.
    Scalia, G.
    Kim, T.
    Levi, Moran
    Aharoni, Daniel
    Cheng, Adrian
    Guerrieri, F.
    Arisaka, Katsushi
    Millaud, Jacques
    Rech, I.
    Resnati, D.
    Marangoni, S.
    Gulinatti, A.
    Ghioni, M.
    Tisa, S.
    Zappa, F.
    Cova, S.
    Weiss, S.
    QUANTUM SENSING AND NANOPHOTONIC DEVICES VII, 2010, 7608
  • [50] Single-molecule detection of fluorescence resonance energy transfer using confocal microscopy
    Kim, Sung Hyun
    Choi, Don Seong
    Kim, Doseok
    JOURNAL OF THE OPTICAL SOCIETY OF KOREA, 2008, 12 (02) : 107 - 111