Advances in sequencing and omics studies in prostate cancer: unveiling molecular pathogenesis and clinical applications

被引:1
作者
Lu, Bingnan [1 ]
Liu, Yifan [1 ]
Yao, Yuntao [2 ]
Yang, Tianyue [1 ]
Zhang, Haoyu [2 ]
Yang, Xinyue [2 ]
Huang, Runzhi [3 ]
Zhou, Wang [1 ]
Pan, Xiuwu [1 ]
Cui, Xingang [1 ]
机构
[1] Shanghai Jiao Tong Univ, Sch Med, Xinhua Hosp, Dept Urol, Shanghai, Peoples R China
[2] Shanghai Jiao Tong Univ, Sch Med, Shanghai, Peoples R China
[3] Naval Med Univ, Affiliated Hosp 1, Dept Burn Surg, Shanghai, Peoples R China
来源
FRONTIERS IN ONCOLOGY | 2024年 / 14卷
基金
上海市自然科学基金; 中国国家自然科学基金;
关键词
prostate cancer; sequencing; omics; molecular pathogenesis; clinical application; TMPRSS2-ERG FUSION TRANSCRIPTS; IN-SITU HYBRIDIZATION; ONCOGENIC ETS FACTORS; HUMAN SEMINAL FLUID; GENE FUSIONS; ANDROGEN RECEPTOR; TARGET GENES; EXPRESSION; TISSUE; REVEALS;
D O I
10.3389/fonc.2024.1355551
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Prostate cancer (PCa) is one of the most threatening health problems for the elderly males. However, our understanding of the disease has been limited by the research technology for a long time. Recently, the maturity of sequencing technology and omics studies has been accelerating the studies of PCa, establishing themselves as an essential impetus in this field. Methods: We assessed Web of Science (WoS) database for publications of sequencing and omics studies in PCa on July 3rd, 2023. Bibliometrix was used to conduct ulterior bibliometric analysis of countries/affiliations, authors, sources, publications, and keywords. Subsequently, purposeful large amounts of literature reading were proceeded to analyze research hotspots in this field. Results: 3325 publications were included in the study. Research associated with sequencing and omics studies in PCa had shown an obvious increase recently. The USA and China were the most productive countries, and harbored close collaboration. CHINNAIYAN AM was identified as the most influential author, and CANCER RESEARCH exhibited huge impact in this field. Highly cited publications and their co-citation relationships were used to filtrate literatures for subsequent literature reading. Based on keyword analysis and large amounts of literature reading, 'the molecular pathogenesis of PCa' and 'the clinical application of sequencing and omics studies in PCa' were summarized as two research hotspots in the field. Conclusion: Sequencing technology had a deep impact on the studies of PCa. Sequencing and omics studies in PCa helped researchers reveal the molecular pathogenesis, and provided new possibilities for the clinical practice of PCa.
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页数:24
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共 152 条
  • [1] The oncogene ERG: a key factor in prostate cancer
    Adamo, P.
    Ladomery, M. R.
    [J]. ONCOGENE, 2016, 35 (04) : 403 - 414
  • [2] Transcriptomics Signature from Next-Generation Sequencing Data Reveals New Transcriptomic Biomarkers Related to Prostate Cancer
    Alkhateeb, Abedalrhman
    Rezaeian, Iman
    Singireddy, Siva
    Cavallo-Medved, Dora
    Porter, Lisa A.
    Rueda, Luis
    [J]. CANCER INFORMATICS, 2019, 18
  • [3] Transcriptomic and Clinical Characterization of Neuropeptide Y Expression in Localized and Metastatic Prostate Cancer: Identification of Novel Prostate Cancer Subtype with Clinical Implications
    Alshalalfa, Mohammed
    Nguyen, Paul L.
    Beltran, Himisha
    Chen, William S.
    Davicioni, Elai
    Zhao, Shuang G.
    Rebbeck, Timothy R.
    Schaeffer, Edward M.
    Lotan, Tamara L.
    Feng, Felix Y.
    Mahal, Brandon A.
    [J]. EUROPEAN UROLOGY ONCOLOGY, 2019, 2 (04): : 405 - 412
  • [4] Genomic profiling of MicroRNA and messenger RNA reveals deregulated MicroRNA expression in prostate cancer
    Ambs, Stefan
    Prueitt, Robyn L.
    Yi, Ming
    Hudson, Robert S.
    Howe, Tiffany M.
    Petrocca, Fabio
    Wallace, Tiffany A.
    Liu, Chang-Gong
    Volinia, Stefano
    Calin, George A.
    Yfantis, Harris G.
    Stephens, Robert M.
    Croce, Carlo M.
    [J]. CANCER RESEARCH, 2008, 68 (15) : 6162 - 6170
  • [5] bibliometrix: An R-tool for comprehensive science mapping analysis
    Aria, Massimo
    Cuccurullo, Corrado
    [J]. JOURNAL OF INFORMETRICS, 2017, 11 (04) : 959 - 975
  • [6] Molecular features of the transition from prostatic intraepithelial neoplasia (PIN) to prostate cancer: Genome-wide gene-expression profiles of prostate cancers and PINs
    Ashida, S
    Nakagawa, H
    Katagiri, T
    Furihata, M
    Iiizumi, M
    Anazawa, Y
    Tsunoda, T
    Takata, R
    Kasahara, K
    Miki, T
    Fujioka, T
    Shuin, T
    Nakamura, Y
    [J]. CANCER RESEARCH, 2004, 64 (17) : 5963 - 5972
  • [7] Duplication of the fusion of TMPRSS2 to ERG sequences identifies fatal human prostate cancer
    Attard, G.
    Clark, J.
    Ambroisine, L.
    Fisher, G.
    Kovacs, G.
    Flohr, P.
    Berney, D.
    Foster, C. S.
    Fletcher, A.
    Gerald, W. L.
    Moller, H.
    Reuter, V.
    De Bono, J. S.
    Scardino, P.
    Cuzick, J.
    Cooper, C. S.
    [J]. ONCOGENE, 2008, 27 (03) : 253 - 263
  • [8] A decrease in 1H nuclear magnetic resonance spectroscopically determined citrate in human seminal fluid accompanies the development of prostate adenocarcinoma
    Averna, TA
    Kline, EE
    Smith, AY
    Sillerud, LO
    [J]. JOURNAL OF UROLOGY, 2005, 173 (02) : 433 - 438
  • [9] ETV1 directs androgen metabolism and confers aggressive prostate cancer in targeted mice and patients
    Baena, Esther
    Shao, Zhen
    Linn, Douglas E.
    Glass, Kimberly
    Hamblen, Melanie J.
    Fujiwara, Yuko
    Kim, Jonghwan
    Minh Nguyen
    Zhang, Xin
    Godinho, Frank J.
    Bronson, Roderick T.
    Mucci, Lorelei A.
    Loda, Massimo
    Yuan, Guo-Cheng
    Orkin, Stuart H.
    Li, Zhe
    [J]. GENES & DEVELOPMENT, 2013, 27 (06) : 683 - 698
  • [10] miR-449a Repression Leads to Enhanced NOTCH Signaling in TMPRSS2:ERG Fusion Positive Prostate Cancer Cells
    Bauer, Simone
    Ratz, Leonie
    Heckmann-Noetzel, Doreen
    Kaczorowski, Adam
    Hohenfellner, Markus
    Kristiansen, Glen
    Duensing, Stefan
    Altevogt, Peter
    Klauck, Sabine M.
    Sueltmann, Holger
    [J]. CANCERS, 2021, 13 (05) : 1 - 18