Advances and challenges of signal readout systems in CRISPR-based biosensors for point-of-care testing of nucleic acid

被引:6
作者
Huang, Di [1 ,2 ]
Xu, Chutian [3 ]
Jiang, Chenhang [1 ,2 ]
Chen, Qixing [4 ]
Xu, Zhinan [1 ,2 ]
Fang, Xiangming [5 ]
机构
[1] Zhejiang Univ, Coll Chem & Biol Engn, Key Lab Biomass Chem Engn, Minist Educ, Hangzhou, Peoples R China
[2] Zhejiang Univ, Inst Biol Engn, Coll Chem & Biol Engn, Hangzhou, Peoples R China
[3] Boston Univ, Dept Biomed Engn, Boston, MA USA
[4] Zhejiang Univ, Sch Med, Childrens Hosp, Natl Clin Res Ctr Child Hlth, Hangzhou, Peoples R China
[5] Zhejiang Univ, Sch Med, Affiliated Hosp 1, Dept Anesthesiol & Intens Care, Hangzhou, Peoples R China
基金
中国博士后科学基金;
关键词
CRISPR Cas; Biosensors; Signal readout; Point -of -care testing; Nucleic acids; QUANTITATIVE DETECTION; PORTABLE DETECTION; MICRORNA DETECTION; LOW-COST; CRISPR-CAS12A; HYDROGEL; NANOPARTICLES; AMPLIFICATION; DIAGNOSTICS; GLUCOMETER;
D O I
10.1016/j.trac.2024.117856
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
In recent years, Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR) systems have emerged as promising tools in point-of-care testing (POCT) for nucleic acids. However, they still suffer from various challenges, including dependency on professional instruments and skilled operators. To address these issues, the integration of portable signal readout methods with CRISPR systems shows great potential in expediting their development and practical deployment in POCT. Consequently, this review provides a concise overview of the structures and characteristics of prevalent Cas nucleases, such as Cas9, Cas12, and Cas13, and summarizes the representative CRISPR-based biosensors employing the mentioned signal readout systems, including fluorescence, electrochemistry, glucose, color, and distance. Finally, we propose current challenges and insights into potential future developments in signal readout methods for CRISPR nucleic acid detection platforms and their prospects for integration into useful detection toolboxes. We hope this review can provide readers with a fresh perspective on the distinctive features and application potential of CRISPR-based biosensors in the context of POCT.
引用
收藏
页数:16
相关论文
共 101 条
  • [1] Distance-based paper/PMMA integrated ELISA-chip for quantitative detection of immunoglobulin G
    Abate, Mahlet Fasil
    Ahmed, Metages Gashaw
    Li, Xingrui
    Yang, Chaoyong
    Zhu, Zhi
    [J]. LAB ON A CHIP, 2020, 20 (19) : 3625 - 3632
  • [2] A glucose meter interface for point-of-care gene circuit-based diagnostics
    Amalfitano, Evan
    Karlikow, Margot
    Norouzi, Masoud
    Jaenes, Katariina
    Cicek, Seray
    Masum, Fahim
    Mousavi, Peivand Sadat
    Guo, Yuxiu
    Tang, Laura
    Sydor, Andrew
    Ma, Duo
    Pearson, Joel D.
    Trcka, Daniel
    Pinette, Mathieu
    Ambagala, Aruna
    Babiuk, Shawn
    Pickering, Bradley
    Wrana, Jeff
    Bremner, Rod
    Mazzulli, Tony
    Sinton, David
    Brumell, John H.
    Green, Alexander A.
    Pardee, Keith
    [J]. NATURE COMMUNICATIONS, 2021, 12 (01)
  • [3] Nucleic Acid Detection Using CRISPR/Cas Biosensing Technologies
    Aman, Rashid
    Mahas, Ahmed
    Mahfouz, Magdy
    [J]. ACS SYNTHETIC BIOLOGY, 2020, 9 (06): : 1226 - 1233
  • [4] Boyd M., 2016, Surgery, V34, P91, DOI [10.1016/j.mpsur.2015.11.004, DOI 10.1016/J.MPSUR.2015.11.004]
  • [5] Small CRISPR RNAs guide antiviral defense in prokaryotes
    Brouns, Stan J. J.
    Jore, Matthijs M.
    Lundgren, Magnus
    Westra, Edze R.
    Slijkhuis, Rik J. H.
    Snijders, Ambrosius P. L.
    Dickman, Mark J.
    Makarova, Kira S.
    Koonin, Eugene V.
    van der Oost, John
    [J]. SCIENCE, 2008, 321 (5891) : 960 - 964
  • [6] CRISPR/Cas13a-Powered Electrochemical Microfluidic Biosensor for Nucleic Acid Amplification-Free miRNA Diagnostics
    Bruch, Richard
    Baaske, Julia
    Chatelle, Claire
    Meirich, Mailin
    Madlener, Sibylle
    Weber, Wilfried
    Dincer, Can
    Urban, Gerald Anton
    [J]. ADVANCED MATERIALS, 2019, 31 (51)
  • [7] Point of care testing for infectious diseases
    Chen, Hui
    Liu, Kengku
    Li, Zhao
    Wang, Ping
    [J]. CLINICA CHIMICA ACTA, 2019, 493 : 138 - 147
  • [8] CRISPR-Cas12a target binding unleashes indiscriminate single-stranded DNase activity
    Chen, Janice S.
    Ma, Enbo
    Harrington, Lucas B.
    Da Costa, Maria
    Tian, Xinran
    Palefsky, Joel M.
    Doudna, Jennifer A.
    [J]. SCIENCE, 2018, 360 (6387) : 436 - +
  • [9] N-doped MoS2-nanoflowers as peroxidase-like nanozymes for total antioxidant capacity assay
    Chen, Jing
    Xu, Fanghong
    Zhang, Qian
    Li, Shuying
    [J]. ANALYTICA CHIMICA ACTA, 2021, 1180
  • [10] Label-Free Colorimetric Method for Detection of Vibrio parahaemolyticus by Trimming the G-Quadruplex DNAzyme with CRISPR/Cas12a
    Chen, Xueyun
    Wang, Liu
    He, Fang
    Chen, Ganghui
    Bai, Linlin
    He, Kaiyu
    Zhang, Fang
    Xu, Xiahong
    [J]. ANALYTICAL CHEMISTRY, 2021, 93 (42) : 14300 - 14306