Heterogeneity in Liver Cancer Immune Microenvironment: Emerging Single-Cell and Spatial Perspectives

被引:0
作者
Li, Caiyi Cherry [1 ]
Liu, Meng [1 ]
Lee, Hsin-Pei [1 ]
Wu, Wenqi [1 ]
Ma, Lichun [1 ,2 ]
机构
[1] NCI, Canc Data Sci Lab, Ctr Canc Res, Bethesda, MD USA
[2] NCI, Liver Canc Program, Ctr Canc Res, Bethesda, MD USA
关键词
liver cancer; tumor immune microenvironment; immunotherapy; single cell and spatial omics; tumor heterogeneity; HEPATOCELLULAR-CARCINOMA; T-CELL; TUMOR MICROENVIRONMENT; DENDRITIC CELLS; B-CELLS; LANDSCAPE; IMMUNOTHERAPY; THERAPY; DIFFERENTIATION; MACROPHAGES;
D O I
10.1055/s-0044-1787152
中图分类号
R57 [消化系及腹部疾病];
学科分类号
摘要
Primary liver cancer is a solid malignancy with a high mortality rate. The success of immunotherapy has shown great promise in improving patient care and highlights a crucial need to understand the complexity of the liver tumor immune microenvironment (TIME). Recent advances in single-cell and spatial omics technologies, coupled with the development of systems biology approaches, are rapidly transforming the landscape of tumor immunology. Here we review the cellular landscape of liver TIME from single-cell and spatial perspectives. We also discuss the cellular interaction networks within the tumor cell community in regulating immune responses. We further highlight the challenges and opportunities with implications for biomarker discovery, patient stratification, and combination immunotherapies.
引用
收藏
页码:133 / 146
页数:14
相关论文
共 148 条
[1]   SpaGE: Spatial Gene Enhancement using scRNA-seq [J].
Abdelaal, Tamim ;
Mourragui, Soufiane ;
Mahfouz, Ahmed ;
Reinders, Marcel J. T. .
NUCLEIC ACIDS RESEARCH, 2020, 48 (18) :E107-E107
[2]   Increase in CD14+HLA-DR-/low myeloid-derived suppressor cells in hepatocellular carcinoma patients and its impact on prognosis [J].
Arihara, Fumitaka ;
Mizukoshi, Eishiro ;
Kitahara, Masaaki ;
Takata, Yoshiko ;
Arai, Kuniaki ;
Yamashita, Tatsuya ;
Nakamoto, Yasunari ;
Kaneko, Shuichi .
CANCER IMMUNOLOGY IMMUNOTHERAPY, 2013, 62 (08) :1421-1430
[3]   Tumor-Associated Macrophages in Hepatocellular Carcinoma Pathogenesis, Prognosis and Therapy [J].
Arvanitakis, Konstantinos ;
Koletsa, Triantafyllia ;
Mitroulis, Ioannis ;
Germanidis, Georgios .
CANCERS, 2022, 14 (01)
[4]   Conserved pan-cancer microenvironment subtypes predict response to immunotherapy [J].
Bagaev, Alexander ;
Kotlov, Nikita ;
Nomie, Krystle ;
Svekolkin, Viktor ;
Gafurov, Azamat ;
Isaeva, Olga ;
Osokin, Nikita ;
Kozlov, Ivan ;
Frenkel, Felix ;
Gancharova, Olga ;
Almog, Nava ;
Tsiper, Maria ;
Ataullakhanov, Ravshan ;
Fowler, Nathan .
CANCER CELL, 2021, 39 (06) :845-+
[5]   The NK cell-cancer cycle: advances and new challenges in NK cell-based immunotherapies [J].
Bald, Tobias ;
Krummel, Matthew F. ;
Smyth, Mark J. ;
Barry, Kevin C. .
NATURE IMMUNOLOGY, 2020, 21 (08) :835-847
[6]   Cancer cell states recur across tumor types and form specific interactions with the tumor microenvironment [J].
Barkley, Dalia ;
Moncada, Reuben ;
Pour, Maayan ;
Liberman, Deborah A. ;
Dryg, Ian ;
Werba, Gregor ;
Wang, Wei ;
Baron, Maayan ;
Rao, Anjali ;
Xia, Bo ;
Franca, Gustavo S. ;
Weil, Alejandro ;
Delair, Deborah F. ;
Hajdu, Cristina ;
Lund, Amanda W. ;
Osman, Iman ;
Yanai, Itai .
NATURE GENETICS, 2022, 54 (08) :1192-+
[7]   T-cell exhaustion and residency dynamics inform clinical outcomes in hepatocellular carcinoma [J].
Barsch, Maryam ;
Salie, Henrike ;
Schlaak, Alexandra Emilia ;
Zhang, Zhen ;
Hess, Moritz ;
Mayer, Lena Sophie ;
Tauber, Catrin ;
Otto-Mora, Patricia ;
Ohtani, Takuya ;
Nilsson, Tobias ;
Wischer, Lara ;
Winkler, Frances ;
Manne, Sasikant ;
Rech, Andrew ;
Schmitt-Graeff, Annette ;
Bronsert, Peter ;
Hofmann, Maike ;
Neumann-Haefelin, Christoph ;
Boettler, Tobias ;
Fichtner-Feigl, Stefan ;
van Boemmel, Florian ;
Berg, Thomas ;
Rimassa, Lorenza ;
Di Tommaso, Luca ;
Saeed, Anwaar ;
D'Alessio, Antonio ;
Pinato, David J. ;
Bettinger, Dominik ;
Binder, Harald ;
Wherry, E. John ;
Schultheiss, Michael ;
Thimme, Robert ;
Bengsch, Bertram .
JOURNAL OF HEPATOLOGY, 2022, 77 (02) :397-409
[8]   Transcriptome profiling of human FoxP3+ regulatory T cells [J].
Bhairavabhotla, Ravikiran ;
Kim, Yong C. ;
Glass, Deborah D. ;
Escobar, Thelma M. ;
Patel, Mira C. ;
Zahr, Rami ;
Nguyen, Cuong K. ;
Kilaru, Gokhul K. ;
Muljo, Stefan A. ;
Shevach, Ethan M. .
HUMAN IMMUNOLOGY, 2016, 77 (02) :201-213
[9]  
Bian J, 2020, AM J CANCER RES, V10, P4585
[10]   Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram [J].
Biancalani, Tommaso ;
Scalia, Gabriele ;
Buffoni, Lorenzo ;
Avasthi, Raghav ;
Lu, Ziqing ;
Sanger, Aman ;
Tokcan, Neriman ;
Vanderburg, Charles R. ;
Segerstolpe, Asa ;
Zhang, Meng ;
Avraham-Davidi, Inbal ;
Vickovic, Sanja ;
Nitzan, Mor ;
Ma, Sai ;
Subramanian, Ayshwarya ;
Lipinski, Michal ;
Buenrostro, Jason ;
Brown, Nik Bear ;
Fanelli, Duccio ;
Zhuang, Xiaowei ;
Macosko, Evan Z. ;
Regev, Aviv .
NATURE METHODS, 2021, 18 (11) :1352-+