Diversity and structure of the deep- sea sponge microbiome in the equatorial Atlantic Ocean

被引:0
作者
Williams, Sam E. [1 ,2 ]
Varliero, Gilda [3 ]
Lurgi, Miguel [4 ]
Stach, James E. M. [5 ]
Race, Paul R. [5 ]
Curnow, Paul [1 ]
机构
[1] Univ Bristol, Sch Biochem, Univ Walk, Bristol BS8 1TD, England
[2] Tech Univ Denmark, Ctr Biosustainabil, Novo Nord Fdn, Bldg 220, DK-2800 Lyngby, Denmark
[3] Swiss Fed Inst Forest Snow & Landscape Res WSL, Rhizosphere Proc Grp, Birmensdorf, Switzerland
[4] Swansea Univ, Dept Biosci, Singleton Pk, Swansea SA2 8PP, Wales
[5] Newcastle Univ, Sch Nat & Environm Sci, Newcastle Upon Tyne NE1 7RU, England
来源
MICROBIOLOGY-SGM | 2024年 / 170卷 / 07期
基金
英国医学研究理事会; 英国生物技术与生命科学研究理事会; 欧洲研究理事会;
关键词
16S rRNA gene analysis; deep sea; metataxonomics; microbiome; Porifera; sponge; BACTERIAL; INSIGHTS;
D O I
10.1099/mic.0.001478
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Sponges (phylum Porifera) harbour specific microbial communities that drive the ecology and evolution of the host. Understanding the structure and dynamics of these communities is emerging as a primary focus in marine microbial ecology research. Much of the work to date has focused on sponges from warm and shallow coastal waters, while sponges from the deep ocean remain less well studied. Here, we present a metataxonomic analysis of the microbial consortia associated with 23 individual deep- sea sponges. We identify a high abundance of archaea relative to bacteria across these communities, with certain sponge microbiomes comprising more than 90 % archaea. Specifically, the archaeal family Nitrosopumilaceae is prolific, comprising over 99 % of all archaeal reads. Our analysis revealed that sponge microbial communities reflect the host sponge phylogeny, indicating a key role for host taxonomy in defining microbiome composition. Our work confirms the contribution of both evolutionary and environmental processes to the composition of microbial communities in deep- sea sponges.
引用
收藏
页数:12
相关论文
共 50 条
  • [1] Report on deep-sea bonelliids (Echiura) from the East Equatorial Atlantic Ocean
    Biseswar, Ramlall
    ZOOSYSTEMA, 2010, 32 (01) : 139 - 154
  • [2] Deep-sea pelagic ichthyonekton diversity in the Atlantic Ocean and the adjacent sector of the Southern Ocean
    Fock, Heino O.
    GLOBAL ECOLOGY AND BIOGEOGRAPHY, 2009, 18 (02): : 178 - 191
  • [3] Distribution and diversity of deep-sea sponge grounds on the Rosemary Bank Seamount, NE Atlantic
    F. D. McIntyre
    J. Drewery
    D. Eerkes-Medrano
    F. C. Neat
    Marine Biology, 2016, 163
  • [4] Distribution and diversity of deep-sea sponge grounds on the Rosemary Bank Seamount, NE Atlantic
    McIntyre, F. D.
    Drewery, J.
    Eerkes-Medrano, D.
    Neat, F. C.
    MARINE BIOLOGY, 2016, 163 (06)
  • [5] Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean
    Regina Schauer
    Christina Bienhold
    Alban Ramette
    Jens Harder
    The ISME Journal, 2010, 4 : 159 - 170
  • [6] Diversity of culturable bacteria in deep-sea water from the South Atlantic Ocean
    Wang Kai
    Yan Peisheng
    Ma Rui
    Jia Wenwen
    Shao Zongze
    BIOENGINEERED, 2017, 8 (05) : 572 - 584
  • [7] Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean
    Schauer, Regina
    Bienhold, Christina
    Ramette, Alban
    Harder, Jens
    ISME JOURNAL, 2010, 4 (02) : 159 - 170
  • [8] Diversity, structure and convergent evolution of the global sponge microbiome
    Thomas, Torsten
    Moitinho-Silva, Lucas
    Lurgi, Miguel
    Bjoerk, Johannes R.
    Easson, Cole
    Astudillo-Garcia, Carmen
    Olson, Julie B.
    Erwin, Patrick M.
    Lopez-Legentil, Susanna
    Luter, Heidi
    Chaves-Fonnegra, Andia
    Costa, Rodrigo
    Schupp, Peter J.
    Steindler, Laura
    Erpenbeck, Dirk
    Gilbert, Jack
    Knight, Rob
    Ackermann, Gail
    Lopez, Jose Victor
    Taylor, Michael W.
    Thacker, Robert W.
    Montoya, Jose M.
    Hentschel, Ute
    Webster, Nicole S.
    NATURE COMMUNICATIONS, 2016, 7
  • [9] Bacterial Diversity in Deep-Sea Sediments from Afanasy Nikitin Seamount, Equatorial Indian Ocean
    Khandeparker, Rakhee
    Meena, Ram Murti
    Deobagkar, Deepti
    GEOMICROBIOLOGY JOURNAL, 2014, 31 (10) : 942 - 949
  • [10] Unveiling the Chemical Diversity of the Deep-Sea Sponge Characella pachastrelloides
    Afoullouss, Sam
    Sanchez, Anthony R.
    Jennings, Laurence K.
    Kee, Younghoon
    Allcock, A. Louise
    Thomas, Olivier P.
    MARINE DRUGS, 2022, 20 (01)