Genetic Predisposition of Atherosclerotic Cardiovascular Disease in Ancient Human Remains

被引:1
作者
Wurst, Christina [1 ,2 ]
Maixner, Frank [1 ]
Paladin, Alice [1 ]
Mussauer, Alexandra [1 ]
Valverde, Guido [1 ]
Narula, Jagat [3 ]
Thompson, Randall [4 ]
Zink, Albert [1 ]
机构
[1] Eurac Res, Inst Mummy Studies, Viale Druso 1, I-39100 Bozen Bolzano, Italy
[2] Johannes Gutenberg Univ Mainz, Inst Organism & Mol Evolut iomE, Palaeogenet Grp, Mainz, Germany
[3] McGovern Med Sch, Med & Cardiol, Houston, TX USA
[4] St Lukes Mid Amer Heart Inst, Kansas City, MO USA
来源
ANNALS OF GLOBAL HEALTH | 2024年 / 90卷 / 01期
关键词
Polygenic Risk Score (PRS); ancient DNA (aDNA); mummy; atherosclerosis; atherosclerotic cardiovascular disease (ASCVD); calcified atherosclerotic plaques; targeted enrichment capture; CORONARY-ARTERY-DISEASE; ASSOCIATION; COMMON;
D O I
10.5334/aogh.4366
中图分类号
R1 [预防医学、卫生学];
学科分类号
1004 ; 120402 ;
摘要
Background: Several computed tomographic studies have shown the presence of atherosclerosis in ancient human remains. However, while it is important to understand the development of atherosclerotic cardiovascular disease (ASCVD), genetic data concerning the prevalence of the disease -associated single nucleotide polymorphisms (SNPs) in our ancestors are scarce. Objective: For a better understanding of the role of genetics in the evolution of ASCVD, we applied an enrichment capture sequencing approach to mummified human remains from different geographic regions and time periods. Methods: Twenty-two mummified individuals were analyzed for their genetic predisposition of ASCVD. Next -generation sequencing methods were applied to ancient DNA (aDNA) samples, including a novel enrichment approach specifically designed to capture SNPs associated with ASCVD in genome-wide association studies of modern humans. Findings: Five out of 22 ancient individuals passed all filter steps for calculating a weighted polygenic risk score (PRS) based on 87 SNPs in 56 genes. PRSs were correlated to scores obtained from contemporary people from around the world and cover their complete range. The genetic results of the ancient individuals reflect their phenotypic results, given that the only two mummies showing calcified atherosclerotic arterial plaques on computed tomography scans are the ones exhibiting the highest calculated PRSs. Conclusions: These data show that alleles associated with ASCVD have been widespread for at least 5,000 years. Despite some limitations due to the nature of aDNA, our approach has the potential to lead to a better understanding of the interaction between environmental and genetic influences on the development of ASCVD.
引用
收藏
页码:15 / 15
页数:1
相关论文
共 54 条
  • [1] Polygenic risk score and coronary artery disease: A meta-analysis of 979,286 participant data
    Agbaedeng, Thomas A.
    Noubiap, Jean Jacques
    Mato, Edith Pascale Mofo
    Chew, Derek P.
    Figtree, Gemma A.
    Said, M. Abdullah
    van der Harst, Pim
    [J]. ATHEROSCLEROSIS, 2021, 333 : 48 - 55
  • [2] Computed Tomographic Assessment of Atherosclerosis in Ancient Egyptian Mummies
    Allam, Adel H.
    Thompson, Randall C.
    Wann, L. Samuel
    Miyamoto, Michael I.
    Thomas, Gregory S.
    [J]. JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2009, 302 (19): : 2091 - 2094
  • [3] Ethics of DNA research on human remains: five globally applicable guidelines
    Alpaslan-Roodenberg, Songul
    Anthony, David
    Babiker, Hiba
    Banffy, Eszter
    Booth, Thomas
    Capone, Patricia
    Deshpande-Mukherjee, Arati
    Eisenmann, Stefanie
    Fehren-Schmitz, Lars
    Frachetti, Michael
    Fujita, Ricardo
    Frieman, Catherine J.
    Fu, Qiaomei
    Gibbon, Victoria
    Haak, Wolfgang
    Hajdinjak, Mateja
    Hofmann, Kerstin P.
    Holguin, Brian
    Inomata, Takeshi
    Kanzawa-Kiriyama, Hideaki
    Keegan, William
    Kelso, Janet
    Krause, Johannes
    Kumaresan, Ganesan
    Kusimba, Chapurukha
    Kusimba, Sibel
    Lalueza-Fox, Carles
    Llamas, Bastien
    MacEachern, Scott
    Mallick, Swapan
    Matsumura, Hirofumi
    Morales-Arce, Ana Y.
    Matuzeviciute, Giedre Motuzaite
    Mushrif-Tripathy, Veena
    Nakatsuka, Nathan
    Nores, Rodrigo
    Ogola, Christine
    Okumura, Mercedes
    Patterson, Nick
    Pinhasi, Ron
    Prasad, Samayamantri P. R.
    Prendergast, Mary E.
    Punzo, Jose Luis
    Reich, David
    Sawafuji, Rikai
    Sawchuk, Elizabeth
    Schiffels, Stephan
    Sedig, Jakob
    Shnaider, Svetlana
    Sirak, Kendra
    [J]. NATURE, 2021, 599 (7883) : 41 - 46
  • [4] A global reference for human genetic variation
    Altshuler, David M.
    Durbin, Richard M.
    Abecasis, Goncalo R.
    Bentley, David R.
    Chakravarti, Aravinda
    Clark, Andrew G.
    Donnelly, Peter
    Eichler, Evan E.
    Flicek, Paul
    Gabriel, Stacey B.
    Gibbs, Richard A.
    Green, Eric D.
    Hurles, Matthew E.
    Knoppers, Bartha M.
    Korbel, Jan O.
    Lander, Eric S.
    Lee, Charles
    Lehrach, Hans
    Mardis, Elaine R.
    Marth, Gabor T.
    McVean, Gil A.
    Nickerson, Deborah A.
    Wang, Jun
    Wilson, Richard K.
    Boerwinkle, Eric
    Doddapaneni, Harsha
    Han, Yi
    Korchina, Viktoriya
    Kovar, Christie
    Lee, Sandra
    Muzny, Donna
    Reid, Jeffrey G.
    Zhu, Yiming
    Chang, Yuqi
    Feng, Qiang
    Fang, Xiaodong
    Guo, Xiaosen
    Jian, Min
    Jiang, Hui
    Jin, Xin
    Lan, Tianming
    Li, Guoqing
    Li, Jingxiang
    Li, Yingrui
    Liu, Shengmao
    Liu, Xiao
    Lu, Yao
    Ma, Xuedi
    Tang, Meifang
    Wang, Bo
    [J]. NATURE, 2015, 526 (7571) : 68 - +
  • [5] Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
    Andrews, RM
    Kubacka, I
    Chinnery, PF
    Lightowlers, RN
    Turnbull, DM
    Howell, N
    [J]. NATURE GENETICS, 1999, 23 (02) : 147 - 147
  • [6] Aufderheide A.C., 2003, SCI STUDY MUMMIES
  • [7] Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls
    Burton, Paul R.
    Clayton, David G.
    Cardon, Lon R.
    Craddock, Nick
    Deloukas, Panos
    Duncanson, Audrey
    Kwiatkowski, Dominic P.
    McCarthy, Mark I.
    Ouwehand, Willem H.
    Samani, Nilesh J.
    Todd, John A.
    Donnelly, Peter
    Barrett, Jeffrey C.
    Davison, Dan
    Easton, Doug
    Evans, David
    Leung, Hin-Tak
    Marchini, Jonathan L.
    Morris, Andrew P.
    Spencer, Chris C. A.
    Tobin, Martin D.
    Attwood, Antony P.
    Boorman, James P.
    Cant, Barbara
    Everson, Ursula
    Hussey, Judith M.
    Jolley, Jennifer D.
    Knight, Alexandra S.
    Koch, Kerstin
    Meech, Elizabeth
    Nutland, Sarah
    Prowse, Christopher V.
    Stevens, Helen E.
    Taylor, Niall C.
    Walters, Graham R.
    Walker, Neil M.
    Watkins, Nicholas A.
    Winzer, Thilo
    Jones, Richard W.
    McArdle, Wendy L.
    Ring, Susan M.
    Strachan, David P.
    Pembrey, Marcus
    Breen, Gerome
    St Clair, David
    Caesar, Sian
    Gordon-Smith, Katherine
    Jones, Lisa
    Fraser, Christine
    Green, Elain K.
    [J]. NATURE, 2007, 447 (7145) : 661 - 678
  • [8] Pulling out the 1%: Whole-Genome Capture for the Targeted Enrichment of Ancient DNA Sequencing Libraries
    Carpenter, Meredith L.
    Buenrostro, Jason D.
    Valdiosera, Cristina
    Schroeder, Hannes
    Allentoft, Morten E.
    Sikora, Martin
    Rasmussen, Morten
    Gravel, Simon
    Guillen, Sonia
    Nekhrizov, Georgi
    Leshtakov, Krasimir
    Dimitrova, Diana
    Theodossiev, Nikola
    Pettener, Davide
    Luiselli, Donata
    Sandoval, Karla
    Moreno-Estrada, Andres
    Li, Yingrui
    Wang, Jun
    Gilbert, M. Thomas P.
    Willerslev, Eske
    Greenleaf, William J.
    Bustamante, Carlos D.
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 2013, 93 (05) : 852 - 864
  • [9] Genetics of coronary artery disease in the post-GWAS era
    Chen, Zhifen
    Schunkert, Heribert
    [J]. JOURNAL OF INTERNAL MEDICINE, 2021, 290 (05) : 980 - 992
  • [10] Cheng Tsung O, 2012, Methodist Debakey Cardiovasc J, V8, P47