Complete genome sequence data of Pseudomonas nitroreducens L4, an endophyte isolated from cotton plants

被引：0
|
作者：
Liu, Haiyang [1 ,2 ]
Zhuang, Lubo [3 ]
Zeng, Qingchao [2 ]
机构：
[1] Xinjiang Acad Agr Sci, Inst Plant Protect, Urumqi 830091, Peoples R China
[2] China Agr Univ, Dept Plant Pathol, MOA Key Lab Pest Monitoring & Green Management, Beijing 100193, Peoples R China
[3] Beijing Acad Agr & Forestry Sci, Inst Plant Protect, Beijing 100097, Peoples R China
来源：
DATA IN BRIEF | 2024年 / 55卷
基金：
中国博士后科学基金;
关键词：
Pseudomonas nitroreducens; Biocontrol; Genome sequence; Cotton verticillium wilt; Endophyte; BIOCONTROL;
D O I：
10.1016/j.dib.2024.110639
中图分类号：
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
Pseudomonas nitroreducens L4 was isolated from the interior of cotton plants, which showed strong biocontrol activity against Verticillium dahlia and other fungal pathogens. To elucidate the biocontrol mechanism, the genome sequence of L4 was sequenced using the Illumina and Nanopore sequencing platform. The assembled genome of L4 consisted of a single circular chromosome was 6,229,472 bp, with an average GC content of 64.95 %, 5,629 protein -coding genes, 72 tRNA, 16 rRNA and 1 tm RNA. Six secondary metabolite biosynthetic gene clusters are identified in the genome. The genome sequence provided a theoretical basis for analyzing the biocontrol mechanism of this strain. (c) 2024 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY license
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页数：6
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