TYK2, IFITM3, IFNAR2 and OAS3 single-nucleotide polymorphisms among severe COVID-19 ICU patients in Morocco

被引:4
作者
Benmansour, R. [1 ]
Tagajdid, M. R. [1 ]
El Hamzaoui, H. [2 ,3 ]
Fjouji, S. [4 ]
Doghmi, N. [4 ]
Houba, A. [4 ]
Belbacha, I. [5 ]
Elkochri, S. [1 ]
Aabi, R. [1 ]
Elannaz, H. [1 ]
Laraqui, A. [1 ]
El Mchichi, B. [1 ]
Chmitah, T. [1 ]
Touil, N. [1 ]
Ennibi, K. [1 ]
Eljaoudi, R. [6 ]
Elmir, E. [5 ]
Lahlou, I. Amine [1 ]
Oumzil, H. [6 ]
机构
[1] Univ Mohammed V Rabat, Mohamed V Military Teaching Hosp, Ctr Virol Infect & Trop Dis, Rabat 10100, Morocco
[2] Univ Mohamed V Rabat, Univ Hosp Ibn Sina Rabat, Emergency Dept, Rabat, Morocco
[3] Univ Mohamed V Rabat, Sch Med & Pharm, Rabat, Morocco
[4] Univ Mohammed V Rabat, Mohamed V Military Teaching Hosp, Dept Anesthesia, Rabat, Morocco
[5] Inst Natl Hyg, Virol Dept, Rabat, Morocco
[6] Univ Mohammed V Rabat, Sch Med & Pharm, Med Biotechnol Lab, Rabat, Morocco
关键词
COVID-19; host genetics; genetic polymorphism; severity; TYK2; IFITM3; IFNAR2; OAS3;
D O I
10.1177/03946320241257241
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Objectives: This study aimed to explore the potential correlation between specific single nucleotide polymorphisms (TYK2, IFITM3, IFNAR2, and OAS3 variants) and the severity of COVID-19 in Moroccan patients. Methods: A genetic analysis was conducted on 109 patients with PCR-confirmed SARS-CoV-2 infection in Morocco. Among these patients, 46% were hospitalized in the intensive care unit, while 59% were not hospitalized. Importantly, all patients lacked known risk factors associated with COVID-19 severity. Genotyping was performed to identify variations in TYK2 rs74956615, IFITM3 rs12252, IFNAR2 rs2236757, and OAS3 rs10735079. Statistical analysis was applied using codominant, dominant and recessive logistic regression models to assess correlations with COVID-19 severity. Results: Our findings revealed no significant correlation between TYK2 rs74956615, IFITM3 rs12252, IFNAR2 rs2236757, and OAS3 rs10735079 with COVID-19 severity in Moroccan patients, as indicated in logistic regression models (p > .05). Interestingly, these results may offer insights into the mitigated impact of the COVID-19 pandemic and the reduced severity observed in SARS-CoV-2 infected patients in Morocco. Age, however, exhibited a significant correlation with severity (p < .001), with a trend towards increased likelihood of ICU admission with advancing age. Additionally, In the severe group, a higher proportion of patients were females (54%), indicating a statistically significant correlation with disease severity (p = .04). Nevertheless, female ICU patients aged above 60 years accounted for 37%, compared to 17% for males. Conclusion: This study underscores the absence of a genetic association between the selected polymorphisms and COVID-19 severity in Moroccan patients. Advanced age emerges as the primary factor influencing the severity of COVID-19 patients without comorbidities. We recommend setting the threshold for advanced age at 60 years as a risk factor for severe forms of COVID-19.
引用
收藏
页数:8
相关论文
共 28 条
[1]   Impact of interferon-induced transmembrane protein 3 gene rs12252 polymorphism on COVID-19 mortality [J].
Ahmadi, Iraj ;
Afifipour, Alireza ;
Sakhaee, Fatemeh ;
Zamani, Mohammad Saber ;
Gheinari, Fahimeh Mirzaei ;
Anvari, Enayat ;
Fateh, Abolfazl .
CYTOKINE, 2022, 157
[2]   Interferon-induced transmembrane protein-3 genetic variant rs12252 is associated with COVID-19 mortality [J].
Alghamdi, Jahad ;
Alaamery, Manal ;
Barhoumi, Tlili ;
Rashid, Mamoon ;
Alajmi, Hala ;
Aljasser, Nasser ;
Alhendi, Yaseen ;
Alkhalaf, Hind ;
Alqahtani, Hanadi ;
Algablan, Omer ;
Alshaya, Abdulraham, I ;
Tashkandi, Nabiha ;
Massadeh, Salam ;
Almuzzaini, Bader ;
Ehaideb, Salleh N. ;
Bosaeed, Mohammad ;
Ayoub, Kamal ;
Yezli, Saber ;
Khan, Anas ;
Alaskar, Ahmed ;
Bouchama, Abderrezak .
GENOMICS, 2021, 113 (04) :1733-1741
[3]  
Beam TA., 2023, Res Soc Adm Pharm, V2023, pS155174112300298X
[4]  
COVID-19 Host Genetics Initiative, 2021, NATURE, DOI DOI 10.1038/s41586-021-03767-x
[5]   Polymorphisms in ACE1, TMPRSS2, IFIH1, IFNAR2, and TYK2 Genes Are Associated with Worse Clinical Outcomes in COVID-19 [J].
Dieter, Cristine ;
Brondani, Leticia de Almeida ;
Lemos, Natalia Emerim ;
Schaeffer, Ariell Freires ;
Zanotto, Caroline ;
Ramos, Denise Taurino ;
Girardi, Eliandra ;
Pellenz, Felipe Mateus ;
Camargo, Joiza Lins ;
Moresco, Karla Suzana ;
da Silva, Lucas Lima ;
Aubin, Mariana Rauback ;
de Oliveira, Mayara Souza ;
Rech, Tatiana Helena ;
Canani, Luis Henrique ;
Gerchman, Fernando ;
Leitao, Cristiane Bauermann ;
Crispim, Daisy .
GENES, 2023, 14 (01)
[6]   IFITM3 restricts the morbidity and mortality associated with influenza [J].
Everitt, Aaron R. ;
Clare, Simon ;
Pertel, Thomas ;
John, Sinu P. ;
Wash, Rachael S. ;
Smith, Sarah E. ;
Chin, Christopher R. ;
Feeley, Eric M. ;
Sims, Jennifer S. ;
Adams, David J. ;
Wise, Helen M. ;
Kane, Leanne ;
Goulding, David ;
Digard, Paul ;
Anttila, Verneri ;
Baillie, J. Kenneth ;
Walsh, Tim S. ;
Hume, David A. ;
Palotie, Aarno ;
Xue, Yali ;
Colonna, Vincenza ;
Tyler-Smith, Chris ;
Dunning, Jake ;
Gordon, Stephen B. ;
Smyth, Rosalind L. ;
Openshaw, Peter J. ;
Dougan, Gordon ;
Brass, Abraham L. ;
Kellam, Paul .
NATURE, 2012, 484 (7395) :519-U146
[7]   COVID-19 with Different Severities: A Multicenter Study of Clinical Features [J].
Feng, Yun ;
Ling, Yun ;
Bai, Tao ;
Xie, Yusang ;
Huang, Jie ;
Li, Jian ;
Xiong, Weining ;
Yang, Dexiang ;
Chen, Rong ;
Lu, Fangying ;
Lu, Yunfei ;
Liu, Xuhui ;
Chen, Yuqing ;
Li, Xin ;
Li, Yong ;
Summah, Hanssa Dwarka ;
Lin, Huihuang ;
Yan, Jiayang ;
Zhou, Min ;
Lu, Hongzhou ;
Qu, Jieming .
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2020, 201 (11) :1380-1388
[8]   Role of OAS gene family in COVID-19 induced heart failure [J].
Gao, Li-Juan ;
He, Zhong-Mei ;
Li, Yi-Ying ;
Yang, Rui-Rui ;
Yan, Min ;
Shang, Xuan ;
Cao, Ji-Min .
JOURNAL OF TRANSLATIONAL MEDICINE, 2023, 21 (01)
[9]  
Graffelman J, 2015, J STAT SOFTW, V64, P1
[10]   Distinct Patterns of IFITM-Mediated Restriction of Filoviruses, SARS Coronavirus, and Influenza A Virus [J].
Huang, I-Chueh ;
Bailey, Charles C. ;
Weyer, Jessica L. ;
Radoshitzky, Sheli R. ;
Becker, Michelle M. ;
Chiang, Jessica J. ;
Brass, Abraham L. ;
Ahmed, Asim A. ;
Chi, Xiaoli ;
Dong, Lian ;
Longobardi, Lindsay E. ;
Boltz, Dutch ;
Kuhn, Jens H. ;
Elledge, Stephen J. ;
Bavari, Sina ;
Denison, Mark R. ;
Choe, Hyeryun ;
Farzan, Michael .
PLOS PATHOGENS, 2011, 7 (01)