A chromosome-level genome assembly of Prosopocoilus inquinatus Westwood, 1848 (Coleoptera: Lucanidae)

被引:1
|
作者
Pang, Bo [1 ]
Zhan, Zhihong [2 ]
Wang, Yunchao [3 ]
机构
[1] Coll Agr & Anim Husb Xizang Autonomous Reg, Plant Protect Dept, Lhasa 850000, Peoples R China
[2] Nanjing Agr Univ, Coll Plant Protect, Dept Entomol, Nanjing 210095, Peoples R China
[3] Zunyi Normal Univ, Coll Biol & Agr, Zunyi 563006, Peoples R China
关键词
BEETLES COLEOPTERA; ANNOTATION; SEQUENCE; WOOD;
D O I
10.1038/s41597-024-03647-9
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Lucanidae (Coleoptera: Scarabaeidae) are fascinating beetles exhibiting significant dimorphism and are widely used as beetle evolutionary study models. However, lacking high-quality genomes prohibits our understanding of Lucanidae. Herein, we proposed a chromosome-level genome assembly of a widespread species, Prosopocoilus inquinatus, combining PacBio HiFi, Illumina, and Hi-C data. The genome size reaches 649.73 Mb, having the scaffold N50 size of 59.50 Mb, and 99.6% (647.13 Mb) of the assembly successfully anchored on 12 chromosomes. The BUSCO analysis of the genome exhibits a completeness of 99.6% (n = 1,367), including 1,362 (98.5%) single-copy BUSCOs and 15 (1.1%) duplicated BUSCOs. The genome annotation identifies that the genome contains 61.41% repeat elements and 13,452 predicted protein-coding genes. This high-quality Lucanidae genome provides treasured genomic information to our knowledge of stag beetles.
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页数:9
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