Identification of a new HIV-1 circulating recombinant form (CRF159_01103) derived from CRF103_01B and CRF01_AE in Hebei Province, China

被引:5
作者
Fan, Weiguang [1 ]
Zhang, Zhen [2 ]
Shi, Haoxi [1 ]
Jia, Jianru [2 ]
Shi, Penghui [1 ]
Chen, Sisi [1 ]
Lu, Xinli [3 ]
机构
[1] Peoples Hosp Baoding, Clin Lab, Baoding 071000, Hebei, Peoples R China
[2] Peoples Hosp Baoding, Infect Div, Baoding 071000, Hebei, Peoples R China
[3] Hebei Prov Ctr Dis Control & Prevent, Dept AIDS Res, Shijiazhuang 050021, Hebei, Peoples R China
关键词
HIV-1; Circulating recombinant forms; CRF159_01103; Hebei;
D O I
10.1038/s41598-024-64156-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Recombinant HIV-1 genomes identified in three or more epidemiological unrelated individuals are defined as circulating recombinant forms (CRFs). CRFs can further recombine with other pure subtypes or recombinants to produce secondary recombinants. In this study, a new HIV-1 intersubtype CRF, designated CRF159_01103, isolated from three men who have sex with men with no epidemiological linkage, was identified in Baoding city, Hebei Province, China. CRF159_01103 was derived from CRF103_01B and CRF01_AE. Bayesian molecular clock analysis was performed on the CRF01-AE and CRF103_01B regions of CRF159_01103. The time of origin of CRF159_01103 was predicted to be 2018-2019, indicating that it is a recent recombinant virus. The emergence of CRF159_01103 has increased the complexity of the HIV-1 epidemic in Hebei Province.
引用
收藏
页数:5
相关论文
共 20 条
[1]   Near full genome characterization of HIV-1 unique recombinant forms in Cameroon reveals dominant CRF02_AG and F2 recombination patterns [J].
Banin, Andrew N. ;
Tuen, Michael ;
Bimela, Jude S. ;
Tongo, Marcel ;
Zappile, Paul ;
Khodadadi-Jamayran, Alireza ;
Nanfack, Aubin J. ;
Okonko, Iheanyi O. ;
Meli, Josephine ;
Wang, Xiaohong ;
Mbanya, Dora ;
Ngogang, Jeanne ;
Gorny, Miroslaw K. ;
Heguy, Adriana ;
Fokunang, Charles ;
Duerr, Ralf .
JOURNAL OF THE INTERNATIONAL AIDS SOCIETY, 2019, 22 (07)
[2]   HIV subtype diversity worldwide [J].
Bbosa, Nicholas ;
Kaleebu, Pontiano ;
Ssemwanga, Deogratius .
CURRENT OPINION IN HIV AND AIDS, 2019, 14 (03) :153-160
[3]   Genetic characteristics of a novel HIV-1 recombinant lineage (CRF103_01B) and its prevalence in northern China [J].
Dai, Man ;
Li, Jia ;
Li, Jie ;
Lu, Hongyan ;
Huang, Chun ;
Lv, Shiyun ;
Huang, Huihuang ;
Xin, Ruolei .
VIRUS GENES, 2023, 59 (04) :643-650
[4]  
[范伟光 Fan Weiguang], 2022, [中华微生物学和免疫学杂志, Chinese Journal of Microbiology and Immunology], V42, P88
[5]   Country Level Diversity of the HIV-1 Pandemic between 1990 and 2015 [J].
Hemelaar, Joris ;
Loganathan, Shanghavie ;
Elangovan, Ramyiadarsini ;
Yun, Jason ;
Dickson-Tetteh, Leslie ;
Kirtley, Shona .
JOURNAL OF VIROLOGY, 2021, 95 (02)
[6]  
Hemelaar J, 2019, LANCET INFECT DIS, V19, P143, DOI [10.1016/S1473-3099(19)30747-9, 10.1016/S1473-3099(18)30647-9]
[7]   Superinfection of defective human immunodeficiency virus type 1 with different subtypes of wild-type virus efficiently produces infectious variants with the initial viral phenotypes by complementation followed by recombination [J].
Iwabu, Yukie ;
Mizuta, Hiroyuki ;
Kawase, Michiko ;
Kameoka, Masanori ;
Goto, Toshiyuki ;
Ikuta, Kazuyoshi .
MICROBES AND INFECTION, 2008, 10 (05) :504-513
[8]  
Li XS, 2016, AIDS RES HUM RETROV, V32, P851, DOI [10.1089/aid.2016.0029, 10.1089/AID.2016.0029]
[9]   Tracing the epidemic history of HIV-1 CRF01_ AE clusters using near-complete genome sequences [J].
Li, Xingguang ;
Liu, Haizhou ;
Liu, Lu ;
Feng, Yi ;
Kalish, Marcia L. ;
Ho, Simon Y. W. ;
Shao, Yiming .
SCIENTIFIC REPORTS, 2017, 7
[10]   Natural presence of the V179D and K103R/V179D mutations associated with resistance to nonnucleoside reverse transcriptase inhibitors in HIV-1 CRF65_cpx strains [J].
Liu, Yongjian ;
Zhang, Yu ;
Li, Hanping ;
Wang, Xiaolin ;
Jia, Lei ;
Han, Jingwan ;
Li, Tianyi ;
Li, Jingyun ;
Li, Lin .
BMC INFECTIOUS DISEASES, 2020, 20 (01)