Characterizing Prion-Like Protein Aggregation: Emerging Nanopore-Based Approaches

被引:4
|
作者
Meyer, Nathan [1 ,2 ]
Torrent, Joan [2 ]
Balme, Sebastien [1 ]
机构
[1] Univ Montpellier, Inst Europeen Membranes, CNRS, ENCSM,UMR5635, Pl Eugene Bataillon, F-34095 Montpellier 5, France
[2] Univ Montpellier, INM, INSERM, F-34095 Montpellier, France
来源
SMALL METHODS | 2024年 / 8卷 / 12期
关键词
amyloid fibers; nanopore; prion-like proteins oligomers; single-molecule techniques; SOLID-STATE NANOPORE; ALPHA-SYNUCLEIN; AMYLOID AGGREGATION; SINGLE-MOLECULE; BETA; TRANSLOCATION; OLIGOMERS; DYNAMICS; FTIR; FIBRILS;
D O I
10.1002/smtd.202400058
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Prion-like protein aggregation is characteristic of numerous neurodegenerative diseases, such as Alzheimer's and Parkinson's diseases. This process involves the formation of aggregates ranging from small and potentially neurotoxic oligomers to highly structured self-propagating amyloid fibrils. Various approaches are used to study protein aggregation, but they do not always provide continuous information on the polymorphic, transient, and heterogeneous species formed. This review provides an updated state-of-the-art approach to the detection and characterization of a wide range of protein aggregates using nanopore technology. For each type of nanopore, biological, solid-state polymer, and nanopipette, discuss the main achievements for the detection of protein aggregates as well as the significant contributions to the understanding of protein aggregation and diagnostics. Prion-like protein aggregation, a hallmark of several neurodegenerative diseases like Alzheimer's and Parkinson's, involves the formation of oligomers and amyloid fibrils. This review outlines the use of nanopore technology including biological, solid-state, polymer, and nanopores as well as nanopipette, for detecting and characterizing protein aggregates. Their achievement for protein aggregation understanding and the application in diagnostics are discussed. image
引用
收藏
页数:13
相关论文
共 50 条
  • [41] The effects of glutamine/asparagine content on aggregation and heterologous prion induction by yeast prion-like domains
    Shattuck, Jenifer E.
    Waechter, Aubrey C.
    Ross, Eric D.
    PRION, 2017, 11 (04) : 249 - 264
  • [42] Effects of Mutations on the Aggregation Propensity of the Human Prion-Like Protein hnRNPA2B1
    Paul, Kacy R.
    Molliex, Amandine
    Cascarina, Sean
    Boncella, Amy E.
    Taylor, J. Paul
    Ross, Eric D.
    MOLECULAR AND CELLULAR BIOLOGY, 2017, 37 (08)
  • [43] Nanopore-based DNA sequencing sensors and CMOS readout approaches
    Habibi, Mehdi
    Dawji, Yunus
    Ghafar-Zadeh, Ebrahim
    Magierowski, Sebastian
    SENSOR REVIEW, 2021, 41 (03) : 292 - 310
  • [44] Polymorphisms within the prion (PrP) and prion-like protein (Doppel) genes in AD
    Golanska, E
    Hulas-Bigoszewska, K
    Rutkiewicz, E
    Styczynska, M
    Peplonska, B
    Barcikowska, M
    Bratosiewicz-Wasik, J
    Liberski, PP
    NEUROLOGY, 2004, 62 (02) : 313 - 315
  • [45] Prion and Prion-Like Protein Strains: Deciphering the Molecular Basis of Heterogeneity in Neurodegeneration
    Scialo, Carlo
    De Cecco, Elena
    Manganotti, Paolo
    Legname, Giuseppe
    VIRUSES-BASEL, 2019, 11 (03):
  • [46] Prion-Like Propagation of Protein Misfolding and Aggregation in Amyotrophic Lateral Sclerosis (vol 12, 262, 2019)
    McAlary, Luke
    Plotkin, Steven S.
    Yerbury, Justin J.
    Cashman, Neil R.
    FRONTIERS IN MOLECULAR NEUROSCIENCE, 2020, 12
  • [47] Expression of the prion-like protein Shadoo in the developing mouse embryo
    Young, Rachel
    Bouet, Stephan
    Polyte, Jacqueline
    Le Guillou, Sandrine
    Passet, Bruno
    Vilotte, Marthe
    Castille, Johan
    Beringue, Vincent
    Le Provost, Fabienne
    Laude, Hubert
    Vilotte, Jean-Luc
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2011, 416 (1-2) : 184 - 187
  • [48] Stress granule assembly is mediated by prion-like aggregation of TIA-1
    Gilks, N
    Kedersha, N
    Ayodele, M
    Shen, L
    Stoecklin, G
    Dember, LM
    Anderson, P
    MOLECULAR BIOLOGY OF THE CELL, 2004, 15 (12) : 5383 - 5398
  • [49] The role of microglia in the prion-like transmission of protein aggregates in neurodegeneration
    Ozturk, Muhammet M.
    Emgard, Jakob
    Garcia-Revilla, Juan
    Fernandez-Calle, Rosalia
    Yang, Yiyi
    Deierborg, Tomas
    Roos, Tomas T.
    BRAIN COMMUNICATIONS, 2025, 7 (02)
  • [50] Accessibility of compact structures and prion-like protein folding property
    Chen, H
    Koh, CG
    Liaw, CY
    MODERN PHYSICS LETTERS B, 2005, 19 (25): : 1241 - 1252