Aquimarina aquimarini sp. nov. and Aquimarina spinulae sp. nov., novel bacterial species with versatile natural product biosynthesis potential isolated from marine sponges

被引:1
作者
Couceiro, Joana [1 ,2 ,3 ]
Marques, Matilde [1 ,2 ,3 ]
Silva, Sandra [1 ,2 ,3 ]
Keller-Costa, Tina [1 ,2 ,3 ]
Costa, Rodrigo [1 ,2 ,3 ]
机构
[1] Univ Lisbon, iBB Inst Bioengn & Biosci, Av Rovisco Pais, P-1049001 Lisbon, Portugal
[2] Univ Lisbon, Inst Super Tecn, i4HB Inst Hlth & Bioecon, Av Rovisco Pais, P-1049001 Lisbon, Portugal
[3] Univ Lisbon, Inst Super Tecn, Dept Bioengn, Av Rovisco Pais, P-1049001 Lisbon, Portugal
关键词
Bacteroidota; Flavobacteriaceae; host-microbe interactions; marine bacteria; secondary metabolism; PACIFIC WHITE SHRIMP; EMENDED DESCRIPTION; LIPID-COMPOSITION; MYTILUS-CORUSCUS; GUT MICROFLORA; GEN; NOV; SEA; SEDIMENT; SEAWATER; MUSSEL;
D O I
10.1099/ijsem.0.006228
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
This study describes two Gram- negative, flexirubin- producing, biofilm- forming, motile - by- gliding and rod- shaped bacteria, isolated from the marine sponges Ircinia variabilis and Sarcotragus spinosulus collected off the coast of Algarve, Portugal. Both strains, designated Aq135T and Aq349T, were classified into the genus Aquimarina by means of 16S rRNA gene sequencing. We then performed phylogenetic, phylogenomic and biochemical analyses to determine whether these strains represent novel Aquimarina species. Whereas the closest 16S rRNA gene relatives to strain Aq135T were Aquimarina macrocephali JAMB N27T (97.8 %) and Aquimarina sediminis w01T (97.1 %), strain Aq349T was more closely related to Aquimarina megaterium XH134T (99.2 %) and Aquimarina atlantica 22II-S11-z7T (98.1 %). Both strains showed genome- wide average nucleotide identity scores below the species level cut - off (95 %) with all Aquimarina type strains with publicly available genomes, including their closest relatives. Digital DNA-DNA hybridization further suggested a novel species status for both strains since values lower than 70 % hybridization level with other Aquimarina type strains were obtained. Strains Aq135T and Aq349T grew from 4 to 30 degrees C and with between 1-5 % (w/v) NaCl in marine broth. The most abundant fatty acids were iso- C17:03 -OH and iso-C15: 0 and the only respiratory quinone was MK - 6. Strain Aq135T was catalase- positive and beta-galactosidase- negative, while Aq349T was catalase- negative and beta-galactosidase- positive. These strains hold unique sets of secondary metabolite biosynthetic gene clusters and are known to produce the peptide antibiotics aquimarins (Aq135T) and the trans - AT polyketide cuniculene (Aq349T), respectively. Based on the polyphasic approach employed in this study, we propose the novel species names Aquimarina aquimarini sp. nov. (type strain Aq135T=DSM 115833T=UCCCB 169T=ATCC TSD-360T) and Aquimarina spinulae sp. nov. (type strain Aq349T=DSM 115834T=UCCCB 170T=ATCC TSD-361T).
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页数:12
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