MiRNA expression as outcome predictor in pediatric AML: systematic evaluation of a new model

被引:1
作者
Ellson, Ivan [1 ]
Martorell-Marugan, Jordi [1 ,2 ]
Carmona-Saez, Pedro [1 ,3 ]
Ramos-Mejia, Veronica [1 ,4 ]
机构
[1] Univ Granada, Ctr Genom & Oncol Res Pfizer, GENYO, PTS,Andalusian Reg Govt, Granada 18016, Spain
[2] Fdn Invest Biosanit Andalucia Oriental Alejandro O, Granada 18012, Spain
[3] Univ Granada, Dept Stat, Granada 18071, Spain
[4] Univ Granada, Fac Sci, Dept Cell Biol, E-18071 Granada, Spain
关键词
ACUTE MYELOID-LEUKEMIA; INHIBITS CELL-PROLIFERATION; UNFAVORABLE PROGNOSIS; MICRORNA EXPRESSION; POOR-PROGNOSIS; UP-REGULATION; BIOMARKER; MIR-155; CLASSIFICATION; LANDSCAPE;
D O I
10.1038/s41525-024-00424-w
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Accurately predicting patient outcomes is essential for optimizing treatment and improving outcomes in pediatric acute myeloid leukemia (AML). In recent years, microRNAs have emerged as a promising prognostic marker, with a growing body of evidence supporting their potential predictive value. We systematically reviewed all previous studies that have analyzed the expression of microRNAs as predictors of survival in pediatric AML and found 16 microRNAs and 4 microRNA signatures previously proposed as predictors of survival. We then used a public access cohort of 1414 pediatric AML patients from the TARGET project to develop a new predictive model using penalized lasso Cox regression based on microRNA expression. Here we propose a new score based on a 37-microRNA signature that is associated with AML and is able to predict survival more accurately than previous microRNA-based methods.
引用
收藏
页数:11
相关论文
共 70 条
  • [1] Dysregulation of miRNA in Leukemia: Exploiting miRNA Expression Profiles as Biomarkers
    Anelli, Luisa
    Zagaria, Antonella
    Specchia, Giorgina
    Musto, Pellegrino
    Albano, Francesco
    [J]. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2021, 22 (13)
  • [2] Azizmohammadi S, 2016, AM J TRANSL RES, V8, P2403
  • [3] Upregulation of microRNA-100 predicts poor prognosis in patients with pediatric acute myeloid leukemia
    Bai, Jin
    Guo, Aiping
    Hong, Ze
    Kuai, Wenxia
    [J]. ONCOTARGETS AND THERAPY, 2012, 5 : 213 - 219
  • [4] Endogenous Tumor Suppressor microRNA-193b: Therapeutic and Prognostic Value in Acute Myeloid Leukemia
    Bhayadia, Raj
    Krowiorz, Kathrin
    Haetscher, Nadine
    Jammal, Razan
    Emmrich, Stephan
    Obulkasim, Askar
    Fiedler, Jan
    Schwarzer, Adrian
    Rouhi, Arefeh
    Heuser, Michael
    Wingert, Susanne
    Bothur, Sabrina
    Doehner, Konstanze
    Maetzig, Tobias
    Ng, Michelle
    Reinhardt, Dirk
    Doehner, Hartmut
    Zwaan, C. Michel
    Eibrink, Marry van den Heuvel
    Heckl, Dirk
    Fornerod, Maarten
    Thum, Thomas
    Humphries, R. Keith
    Rieger, Michael A.
    Kuchenbauer, Florian
    Klusmann, Jan-Henning
    [J]. JOURNAL OF CLINICAL ONCOLOGY, 2018, 36 (10) : 1007 - +
  • [5] The molecular landscape of pediatric acute myeloid leukemia reveals recurrent structural alterations and age-specific mutational interactions (vol 24, pg 103, 2017)
    Bolouri, Hamid
    Farrar, Jason E.
    Triche, Timothy, Jr.
    Ries, Rhonda E.
    Lim, Emilia L.
    Alonzo, Todd A.
    Ma, Yussanne
    Moore, Richard
    Mungall, Andrew J.
    Marra, Marco A.
    Zhang, Jinghui
    Ma, Xiaotu
    Liu, Yu
    Liu, Yanling
    Auvil, Jaime M. Guidry
    Davidsen, Tanja M.
    Gesuwan, Patee
    Hermida, Leandro C.
    Salhia, Bodour
    Capone, Stephen
    Ramsingh, Giridharan
    Zwaan, Christian Michel
    Noort, Sanne
    Piccolo, Stephen R.
    Kolb, E. Anders
    Gamis, Alan S.
    Smith, Malcolm A.
    Gerhard, Daniela S.
    Meshinchi, Soheil
    [J]. NATURE MEDICINE, 2018, 24 (01) : 103 - +
  • [6] miR-335 Represents an Independent Prognostic Marker in Epithelial Ovarian Cancer
    Cao, Jin
    Cai, Jing
    Huang, Da
    Han, Qing
    Chen, Yanxia
    Yang, Qiang
    Yang, Chun
    Kuang, Yan
    Li, Donglin
    Wang, Zehua
    [J]. AMERICAN JOURNAL OF CLINICAL PATHOLOGY, 2014, 141 (03) : 437 - 442
  • [7] microRNA-199a/b-5p enhance imatinib efficacy via repressing WNT2 signaling-mediated protective autophagy in imatinib-resistant chronic myeloid leukemia cells
    Chen, Peng-Hsu
    Liu, Ann-Jeng
    Ho, Kuo-Hao
    Chiu, Ya-Ting
    Lin, Zhe-Harn Anne
    Lee, Yi-Ting
    Shih, Chwen-Ming
    Chen, Ku-Chung
    [J]. CHEMICO-BIOLOGICAL INTERACTIONS, 2018, 291 : 144 - 151
  • [8] Acute Myeloid Leukemia in Children: Emerging Paradigms in Genetics and New Approaches to Therapy
    Conneely, Shannon E.
    Stevens, Alexandra M.
    [J]. CURRENT ONCOLOGY REPORTS, 2021, 23 (02)
  • [9] MicroRNAs Distinguish Cytogenetic Subgroups in Pediatric AML and Contribute to Complex Regulatory Networks in AML-Relevant Pathways
    Daschkey, Svenja
    Roettgers, Silja
    Giri, Anamika
    Bradtke, Jutta
    Teigler-Schlegel, Andrea
    Meister, Gunter
    Borkhardt, Arndt
    Landgraf, Pablo
    [J]. PLOS ONE, 2013, 8 (02):
  • [10] Guidelines for using sigQC for systematic evaluation of gene signatures
    Dhawan, Andrew
    Barberis, Alessandro
    Cheng, Wei-Chen
    Domingo, Enric
    West, Catharine
    Maughan, Tim
    Scott, Jacob G.
    Harris, Adrian L.
    Buffa, Francesca M.
    [J]. NATURE PROTOCOLS, 2019, 14 (05) : 1377 - 1400