Evaluating lignin degradation under limited oxygen conditions by bacterial isolates from forest soil

被引:6
作者
Sumranwanich, Thitinun [1 ]
Amosu, Esther [1 ]
Chankhamhaengdecha, Surang [1 ]
Phetruen, Tanaporn [2 ]
Loktumraks, Wethaka [1 ]
Ounjai, Puey [1 ]
Harnvoravongchai, Phurt [1 ]
机构
[1] Mahidol Univ, Fac Sci, Dept Biol, Bangkok 10400, Thailand
[2] Mahidol Univ, Fac Sci, Dept Biochem, Bangkok 10400, Thailand
关键词
Forest soil; Lignocellulosic biomass; Oxygen limited condition; Lignin degrading bacteria; BETA-KETOADIPATE PATHWAY; DEGRADING BACTERIA; KRAFT LIGNIN; BIODEGRADATION; PSEUDOMONAS; CONVERSION; LACCASE; STRAIN; ENZYME; DECOLORIZATION;
D O I
10.1038/s41598-024-64237-8
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Lignin, a heterogeneous aromatic polymer present in plant biomass, is intertwined with cellulose and hemicellulose fibrils, posing challenges to its effective utilization due to its phenolic nature and recalcitrance to degradation. In this study, three lignin utilizing bacteria, Klebsiella sp. LEA1, Pseudomonas sp. LEA2, and Burkholderia sp. LEA3, were isolated from deciduous forest soil samples in Nan province, Thailand. These isolates were capable of growing on alkali lignin and various lignin-associated monomers at 40 degrees C under microaerobic conditions. The presence of Cu2+ significantly enhanced guaiacol oxidation in Klebsiella sp. LEA1 and Pseudomonas sp. LEA2. Lignin-related monomers and intermediates such as 2,6-dimethoxyphenol, 4-vinyl guaiacol, 4-hydroxybenzoic acid, benzoic acid, catechol, and succinic acid were detected mostly during the late stage of incubation of Klebsiella sp. LEA1 and Pseudomonas sp. LEA2 in lignin minimal salt media via GC-MS analysis. The intermediates identified from Klebsiella sp. LEA1 degradation suggested that conversion and utilization occurred through the beta-ketoadipate (ortho-cleavage) pathway under limited oxygen conditions. The ability of these bacteria to thrive on alkaline lignin and produce various lignin-related intermediates under limited oxygen conditions suggests their potential utility in oxygen-limited processes and the production of renewable chemicals from plant biomass.
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页数:14
相关论文
共 71 条
[1]   Development of novel assays for lignin degradation: comparative analysis of bacterial and fungal lignin degraders [J].
Ahmad, Mark ;
Taylor, Charles R. ;
Pink, David ;
Burton, Kerry ;
Eastwood, Daniel ;
Bending, Gary D. ;
Bugg, Timothy D. H. .
MOLECULAR BIOSYSTEMS, 2010, 6 (05) :815-821
[2]   Enabling the valorization of guaiacol-based lignin: Integrated chemical and biochemical production of cis,cis-muconic acid using metabolically engineered Amycolatopsis sp ATCC 39116 [J].
Barton, Nadja ;
Horbal, Liliya ;
Starck, Soeren ;
Kohlstedt, Michael ;
Luzhetskyy, Andriy ;
Wittmann, Christoph .
METABOLIC ENGINEERING, 2018, 45 :200-210
[3]  
Bholay A. D., 2012, Universal Journal of Environmental Research and Technology, V2, P58
[4]   Enzymatic conversion of lignin into renewable chemicals [J].
Bugg, Timothy D. H. ;
Rahmanpour, Rahman .
CURRENT OPINION IN CHEMICAL BIOLOGY, 2015, 29 :10-17
[5]   The emerging role for bacteria in lignin degradation and bio-product formation [J].
Bugg, Timothy D. H. ;
Ahmad, Mark ;
Hardiman, Elizabeth M. ;
Singh, Rahul .
CURRENT OPINION IN BIOTECHNOLOGY, 2011, 22 (03) :394-400
[6]   Induction of ortho- and meta-cleavage pathways in Pseudomonas in biodegradation of high benzoate concentration: MS identification of catabolic enzymes [J].
Cao, Bin ;
Geng, Anli ;
Loh, Kai-Chee .
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2008, 81 (01) :99-107
[7]  
Casciello Carmine, 2017, Biotechnol Rep (Amst), V13, P49, DOI [10.1016/j.btre.2016.12.005, 10.1016/j.btre.2016.12.005]
[8]   Characterization of a vanillic acid non-oxidative decarboxylation gene cluster from Streptomyces sp D7 [J].
Chow, KT ;
Pope, MK ;
Davies, J .
MICROBIOLOGY-SGM, 1999, 145 :2393-2403
[9]   Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1 [J].
DeAngelis, Kristen M. ;
Sharma, Deepak ;
Varney, Rebecca ;
Simmons, Blake ;
Isern, Nancy G. ;
Markilllie, Lye Meng ;
Nicora, Carrie ;
Norbeck, Angela D. ;
Taylor, Ronald C. ;
Aldrich, Joshua T. ;
Robinson, Errol W. .
FRONTIERS IN MICROBIOLOGY, 2013, 4
[10]   Biodegradation of kraft lignin by a newly isolated anaerobic bacterial strain, Acetoanaerobium sp WJDL-Y2 [J].
Duan, J. ;
Huo, X. ;
Du, W. J. ;
Liang, J. D. ;
Wang, D. Q. ;
Yang, S. C. .
LETTERS IN APPLIED MICROBIOLOGY, 2016, 62 (01) :55-62