Unveiling structural features, chemical reactivity, and bioactivity of a newly synthesized purine derivative through crystallography and computational approaches

被引:3
作者
Abad, Nadeem [1 ]
Buhlak, Shafeek [1 ]
Hajji, Melek [2 ]
Saffour, Sana [1 ]
Akachar, Jihane [1 ]
Kesgun, Yunus [1 ]
Al-Ghulikah, Hanan [3 ]
Hanashalshahaby, Essam [1 ]
Turkez, Hasan [4 ]
Mardinoglu, Adil [1 ,5 ,6 ]
机构
[1] Trustlife Labs, Drug Res & Dev Ctr, TR-34774 Istanbul, Turkiye
[2] Univ Kairouan, Res Unit Electrochem Mat & Environm, Kairouan 3100, Tunisia
[3] Princess Nourah bint Abdulrahman Univ, Coll Sci, Dept Chem, POB 84428, Riyadh 11671, Saudi Arabia
[4] Ataturk Univ, Fac Med, Dept Med Biol, Erzurum, Turkiye
[5] KTH Royal Inst Technol, Sci Life Lab, SE-17165 Stockholm, Sweden
[6] Kings Coll London, Fac Dent Oral & Craniofacial Sci, Ctr Host & Microbiome Interact, London SE1 9RT, England
关键词
Purines; Crystallographic analysis; Noncovalent interactions; Density functional theory; Admet; Cox-2; inhibition; PAIR-PI INTERACTIONS; STACKING; ENERGIES; ACCURATE;
D O I
10.1016/j.molstruc.2024.138400
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We introduce the synthesis and characterization of a novel purine derivative, 2-amino-6-chloro-N,N-diphenyl7H-purine-7-carboxamide. X-ray crystallography was utilized to elucidate its molecular and crystal structure. A comprehensive crystal packing analysis uncovered a network of diverse intermolecular interactions, including classical and unconventional hydrogen bonding. Remarkably, a unique halogen & sdot;& sdot;& sdot;pi (C-Cl & sdot;& sdot;& sdot;pi(ring)) interaction was identified and theoretically analyzed within a multi-approach quantum mechanics (QM) framework, revealing its lone-pair & ctdot;pi (n ->pi*) nature. Furthermore, insights into the electronic and chemical reactivity properties are provided by means of Conceptual Density Functional Theory (CDFT) at wB97X-D/aug-cc-pVTZ level. The compound's drug-likeness, pharmacokinetics, and toxicology profiles are assessed using ADMETlab 2.0. Finally, molecular docking simulations were conducted to evaluate its bioactivity as a potential cyclooxygenase-2 (COX-2) inhibitor. This study significantly advances our understanding of purine structure and reactivity, offering valuable insights for the development of targeted purine-based COX-2 inhibitors and anticancer therapeutics.
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页数:11
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