Comprehensive identification, characterization, and expression analysis of the MORF gene family in Brassica napus

被引:0
|
作者
Xing, Jiani [1 ]
Zhang, Yayi [1 ]
Song, Wenjian [1 ]
Ali, Nadia Ahmed [1 ]
Su, Kexing [1 ]
Sun, Xingxing [1 ]
Sun, Yujia [1 ]
Jiang, Yizhou [1 ]
Zhao, Xiaobo [1 ]
机构
[1] Zhejiang Univ, Inst Nucl Agr Sci, Coll Agr & Biotechnol, Minist Agr & Rural Affairs,Key Lab Nucl Agr Sci,Ke, Hangzhou 310058, Peoples R China
来源
BMC PLANT BIOLOGY | 2024年 / 24卷 / 01期
基金
中国国家自然科学基金;
关键词
MORF gene family; RNA editing; Phylogenetic analysis; Gene expression; Brassica napus; RNA; ARABIDOPSIS; GENOME;
D O I
10.1186/s12870-024-05177-3
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Background RNA editing in chloroplast and mitochondrion transcripts of plants is an important type of post-transcriptional RNA modification in which members of the multiple organellar RNA editing factor gene family (MORF) play a crucial role. However, a systematic identification and characterization of MORF members in Brassica napus is still lacking. Results In this study, a total of 43 MORF genes were identified from the genome of the Brassica napus cultivar "Zhongshuang 11". The Brassica napus MORF (BnMORF) family members were divided into three groups through phylogenetic analysis. BnMORF genes distributed on 14 chromosomes and expanded due to segmental duplication and whole genome duplication repetitions. The majority of BnMORF proteins were predicted to be localized to mitochondria and chloroplasts. The promoter cis-regulatory element analysis, spatial-temporal expression profiling, and co-expression network of BnMORF genes indicated the involvement of BnMORF genes in stress and phytohormone responses, as well as growth and development. Conclusion This study provides a comprehensive analysis of BnMORF genes and lays a foundation for further exploring their physiological functions in Brassica napus.
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页数:16
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