Clinical and molecular correlates of tumor aneuploidy in metastatic non-small cell lung cancer

被引:3
作者
Spurr, Liam F. [1 ,2 ]
Pitroda, Sean P. [2 ,3 ]
机构
[1] Univ Chicago, Pritzker Sch Med, Chicago, IL USA
[2] Univ Chicago, Dept Radiat & Cellular Oncol, Chicago, IL 60637 USA
[3] Univ Chicago, Ludwig Ctr Metastasis Res, 5758 South Maryland Ave,MC 9006, Chicago, IL 60637 USA
关键词
Aneuploidy; Immunotherapy; Anti-tumor immunity; Lung cancer; GENE;
D O I
10.1038/s41598-024-66062-5
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Recent studies have linked elevated tumor aneuploidy to anti-tumor immune suppression and adverse survival following immunotherapy. Herein, we provide supportive evidence for tumor aneuploidy as a biomarker of response to immunotherapy in patients with non-small cell lung cancer (NSCLC). We identify a dose-response relationship between aneuploidy score and patient outcomes. In two independent NSCLC cohorts (n = 659 patients), we demonstrate a novel association between elevated aneuploidy and non-smoking-associated oncogenic driver mutations. Lastly, we report enrichment of TERT amplification and immune-suppressive phenotypes of highly aneuploid NSCLC. Taken together, our findings emphasize a potentially critical role for tumor aneuploidy in guiding immunotherapy treatment strategies.
引用
收藏
页数:10
相关论文
共 36 条
[1]  
Alessi JV., 2023, J. Thorac. Oncol
[2]   Estimating the population abundance of tissue-infiltrating immune and stromal cell populations using gene expression [J].
Becht, Etienne ;
Giraldo, Nicolas A. ;
Lacroix, Laetitia ;
Buttard, Benedicte ;
Elarouci, Nabila ;
Petitprez, Florent ;
Selves, Janick ;
Laurent-Puig, Pierre ;
Sautes-Fridman, Catherine ;
Fridman, Wolf H. ;
de Reynies, Aurelien .
GENOME BIOLOGY, 2016, 17
[3]   Context is everything: aneuploidy in cancer [J].
Ben-David, Uri ;
Amon, Angelika .
NATURE REVIEWS GENETICS, 2020, 21 (01) :44-62
[4]   ImmPort, toward repurposing of open access immunological assay data for translational and clinical research [J].
Bhattacharya, Sanchita ;
Dunn, Patrick ;
Thomas, Cristel G. ;
Smith, Barry ;
Schaefer, Henry ;
Chen, Jieming ;
Hu, Zicheng ;
Zalocusky, Kelly A. ;
Shankar, Ravi D. ;
Shen-Orr, Shai S. ;
Thomson, Elizabeth ;
Wiser, Jeffrey ;
Butte, Atul J. .
SCIENTIFIC DATA, 2018, 5
[5]   Optimizing cancer immunotherapy response prediction by tumor aneuploidy score and fraction of copy number alterations [J].
Chang, Tian-Gen ;
Cao, Yingying ;
Shulman, Eldad D. ;
Ben-David, Uri ;
Schaffer, Alejandro A. ;
Ruppin, Eytan .
NPJ PRECISION ONCOLOGY, 2023, 7 (01)
[6]   Improved prediction of immune checkpoint blockade efficacy across multiple cancer types [J].
Chowell, Diego ;
Yoo, Seong-Keun ;
Valero, Cristina ;
Pastore, Alessandro ;
Krishna, Chirag ;
Lee, Mark ;
Hoen, Douglas ;
Shi, Hongyu ;
Kelly, Daniel W. ;
Patel, Neal ;
Makarov, Vladimir ;
Ma, Xiaoxiao ;
Vuong, Lynda ;
Sabio, Erich Y. ;
Weiss, Kate ;
Kuo, Fengshen ;
Lenz, Tobias L. ;
Samstein, Robert M. ;
Riaz, Nadeem ;
Adusumilli, Prasad S. ;
Balachandran, Vinod P. ;
Plitas, George ;
Hakimi, A. Ari ;
Abdel-Wahab, Omar ;
Shoushtari, Alexander N. ;
Postow, Michael A. ;
Motzer, Robert J. ;
Ladanyi, Marc ;
Zehir, Ahmet ;
Berger, Michael F. ;
Gonen, Mithat ;
Morris, Luc G. T. ;
Weinhold, Nils ;
Chan, Timothy A. .
NATURE BIOTECHNOLOGY, 2022, 40 (04) :499-+
[7]   Tumor aneuploidy correlates with markers of immune evasion and with reduced response to immunotherapy [J].
Davoli, Teresa ;
Uno, Hajime ;
Wooten, Eric C. ;
Elledge, Stephen J. .
SCIENCE, 2017, 355 (6322)
[8]  
Fares Charlene M, 2019, Am Soc Clin Oncol Educ Book, V39, P147, DOI 10.1200/EDBK_240837
[9]   Oncogene-like addiction to aneuploidy in human cancers [J].
Girish, Vishruth ;
Lakhani, Asad A. ;
Thompson, Sarah L. ;
Scaduto, Christine M. ;
Brown, Leanne M. ;
Hagenson, Ryan A. ;
Sausville, Erin L. ;
Mendelson, Brianna E. ;
Kandikuppa, Pranav K. ;
Lukow, Devon A. ;
Yuan, Monet Lou ;
Stevens, Eric C. ;
Lee, Sophia N. ;
Schukken, Klaske M. ;
Akalu, Saron M. ;
Vasudevan, Anand ;
Zou, Charles ;
Salovska, Barbora ;
Li, Wenxue ;
Smith, Joan C. ;
Taylor, Alison M. ;
Martienssen, Robert A. ;
Liu, Yansheng ;
Sun, Ruping ;
Sheltzer, Jason M. .
SCIENCE, 2023, 381 (6660) :848-+
[10]   CDKN2A loss-of-function predicts immunotherapy resistance in non-small cell lung cancer [J].
Gutiontov, Stanley, I ;
Turchan, William Tyler ;
Spurr, Liam F. ;
Rouhani, Sherin J. ;
Chervin, Carolina Soto ;
Steinhardt, George ;
Lager, Angela M. ;
Wanjari, Pankhuri ;
Malik, Renuka ;
Connell, Philip P. ;
Chmura, Steven J. ;
Juloori, Aditya ;
Hoffman, Philip C. ;
Ferguson, Mark K. ;
Donington, Jessica S. ;
Patel, Jyoti D. ;
Vokes, Everett E. ;
Weichselbaum, Ralph R. ;
Bestvina, Christine M. ;
Segal, Jeremy P. ;
Pitroda, Sean P. .
SCIENTIFIC REPORTS, 2021, 11 (01)