Current Knowledge of Base Editing and Prime Editing

被引：4
作者：
Averina, O. A. [1 ,2 ,3 ]
Kuznetsova, S. A. [1 ]
Permyakov, O. A. [1 ,3 ]
Sergiev, P. V. [1 ,2 ,3 ]
机构：
[1] Moscow State Univ, Inst Funct Genom, Moscow 119991, Russia
[2] Moscow State Univ, Belozersky Inst Physico Chem Biol, Moscow 119991, Russia
[3] Moscow State Univ, Chem Fac, Moscow 119991, Russia
来源：
MOLECULAR BIOLOGY | 2024年 / 58卷 / 04期
基金：
俄罗斯科学基金会;
关键词：
CRISPR/Cas technology; base editing; nucleoside deaminases; prime editing; reverse transcriptase; repair systems; GENOMIC DNA; OFF-TARGET; CRISPR-CAS9; EDITORS;
D O I：
10.1134/S0026893324700195
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
Modern genetic engineering technologies, such as base editing and prime editing (PE), have proven to provide the efficient and reliable genome editing tools that obviate the need for donor templates and double-strand breaks (DSBs) introduced in DNA. Relatively new, they quickly gained recognition for their accuracy, simplicity, and multiplexing capabilities. The review summarizes the new literature on the technologies and considers their architecture, methods to create editors, specificity, efficiency, and versatility. Advantages and disadvantages of the editors are discussed along with their prospective use in basic and applied research. The review may be useful for planning genome editing studies and analyzing their results to solve various problems of fundamental biology, biotechnology, medicine, and agriculture.
引用
收藏
页码：571 / 587
页数：17
相关论文
共 117 条
[111]   Causes and consequences of replication stress [J].
Zeman, Michelle K. ;
Cimprich, Karlene A. .
NATURE CELL BIOLOGY, 2014, 16 (01) :2-9
[112]   Enhancement of prime editing via xrRNA motif-joined pegRNA [J].
Zhang, Guiquan ;
Liu, Yao ;
Huang, Shisheng ;
Qu, Shiyuan ;
Cheng, Daolin ;
Yao, Yuan ;
Ji, Quanjiang ;
Wang, Xiaolong ;
Huang, Xingxu ;
Liu, Jianghuai .
NATURE COMMUNICATIONS, 2022, 13 (01)
[113]   Dual base editor catalyzes both cytosine and adenine base conversions in human cells [J].
Zhang, Xiaohui ;
Zhu, Biyun ;
Chen, Liang ;
Xie, Ling ;
Yu, Weishi ;
Wang, Ying ;
Li, Linxi ;
Yin, Shuming ;
Yang, Lei ;
Hu, Handan ;
Han, Honghui ;
Li, Yongmei ;
Wang, Liren ;
Chen, Geng ;
Ma, Xueyun ;
Geng, Hongquan ;
Huang, Wanfeng ;
Pang, Xiufeng ;
Yang, Zuozhen ;
Wu, Yuxuan ;
Siwko, Stefan ;
Kurita, Ryo ;
Nakamura, Yukio ;
Yang, Li ;
Liu, Mingyao ;
Li, Dali .
NATURE BIOTECHNOLOGY, 2020, 38 (07) :856-U10
[114]   Increasing the efficiency and targeting range of cytidine base editors through fusion of a single-stranded DNA-binding protein domain [J].
Zhang, Xiaohui ;
Chen, Liang ;
Zhu, Biyun ;
Wang, Liren ;
Chen, Caiyu ;
Hong, Mengjia ;
Huang, Yifan ;
Li, Huiying ;
Han, Honghui ;
Cai, Bailian ;
Yu, Weishi ;
Yin, Shuming ;
Yang, Lei ;
Yang, Zuozhen ;
Liu, Meizhen ;
Zhang, Ying ;
Mao, Zhiyong ;
Wu, Yuxuan ;
Liu, Mingyao ;
Li, Dali .
NATURE CELL BIOLOGY, 2020, 22 (06) :740-+
[115]  
Zhao DD, 2021, NAT BIOTECHNOL, V39, P35, DOI 10.1038/s41587-020-0592-2
[116]   Off-target RNA mutation induced by DNA base editing and its elimination by mutagenesis [J].
Zhou, Changyang ;
Sun, Yidi ;
Yan, Rui ;
Liu, Yajing ;
Zuo, Erwei ;
Gu, Chan ;
Han, Linxiao ;
Wei, Yu ;
Hu, Xinde ;
Zeng, Rong ;
Li, Yixue ;
Zhou, Haibo ;
Guo, Fan ;
Yang, Hui .
NATURE, 2019, 571 (7764) :275-+
[117]   Insights into DNA substrate selection by APOBEC3G from structural, biochemical, and functional studies [J].
Ziegler, Samantha J. ;
Liu, Chang ;
Landau, Mark ;
Buzovetsky, Olga ;
Desimmie, Belete A. ;
Zhao, Qi ;
Sasaki, Tomoaki ;
Burdick, Ryan C. ;
Pathak, Vinay K. ;
Anderson, Karen S. ;
Xiong, Yong .
PLOS ONE, 2018, 13 (03)
3456789101112