Permittivity tensor imaging: modular label-free imaging of 3D dry mass and 3D orientation at high resolution

被引:8
作者
Yeh, Li-Hao [1 ,6 ]
Ivanov, Ivan E. [1 ]
Chandler, Talon [1 ]
Byrum, Janie R. [1 ,7 ]
Chhun, Bryant B. [1 ,8 ]
Guo, Syuan-Ming [1 ,9 ]
Foltz, Cameron [1 ,10 ]
Hashemi, Ezzat [2 ]
Perez-Bermejo, Juan A. [3 ,11 ]
Wang, Huijun [4 ]
Yu, Yanhao [4 ]
Kazansky, Peter G. [4 ]
Conklin, Bruce R. [3 ,5 ]
Han, May H. [2 ]
Mehta, Shalin B. [1 ]
机构
[1] Chan Zuckerberg Biohub, San Francisco, CA 94158 USA
[2] Stanford Univ, Palo Alto, CA USA
[3] Gladstone Inst, San Francisco, CA USA
[4] Univ Southampton, Southampton, England
[5] Univ Calif San Francisco, San Francisco, CA USA
[6] ASML, San Jose, CA USA
[7] Calif Stem Cell Agcy, South San Francisco, CA USA
[8] Eikon Therapeut, Hayward, CA USA
[9] Insitro, South San Francisco, CA USA
[10] Quantinuum, Broomfield, CO USA
[11] Genentech Inc, South San Francisco, CA USA
基金
欧洲研究理事会; 美国国家卫生研究院;
关键词
BIREFRINGENCE; DIFFUSION; POLARIZATION; FEMTOSECOND; MICROSCOPE; HISTOLOGY; DYNAMICS; MOUSE; ARRAY;
D O I
10.1038/s41592-024-02291-w
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The dry mass and the orientation of biomolecules can be imaged without a label by measuring their permittivity tensor (PT), which describes how biomolecules affect the phase and polarization of light. Three-dimensional (3D) imaging of PT has been challenging. We present a label-free computational microscopy technique, PT imaging (PTI), for the 3D measurement of PT. PTI encodes the invisible PT into images using oblique illumination, polarization-sensitive detection and volumetric sampling. PT is decoded from the data with a vectorial imaging model and a multi-channel inverse algorithm, assuming uniaxial symmetry in each voxel. We demonstrate high-resolution imaging of PT of isotropic beads, anisotropic glass targets, mouse brain tissue, infected cells and histology slides. PTI outperforms previous label-free imaging techniques such as vector tomography, ptychography and light-field imaging in resolving the 3D orientation and symmetry of organelles, cells and tissue. We provide open-source software and modular hardware to enable the adoption of the method. Permittivity tensor imaging is a label-free computational microscopy approach that enables the three-dimensional measurement of molecular permittivity tensors, revealing information about a biomolecule's dry mass and orientation in cells and tissues.
引用
收藏
页码:1257 / 1274
页数:35
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