Majorbio Cloud: A one-stop, comprehensive bioinformatic platform for multiomics analyses

被引:552
作者
Ren, Yi [1 ]
Yu, Guo [1 ]
Shi, Caiping [1 ]
Liu, Linmeng [1 ]
Guo, Quan [1 ]
Han, Chang [1 ]
Zhang, Dan [1 ]
Zhang, Lei [1 ]
Liu, Binxu [1 ]
Gao, Hao [1 ]
Zeng, Jing [1 ]
Zhou, Yong [1 ]
Qiu, Yuhan [1 ]
Wei, Jian [1 ]
Luo, Yanchun [1 ]
Zhu, Fengjuan [1 ]
Li, Xiaojie [1 ]
Wu, Qin [1 ]
Li, Bing [1 ]
Fu, Wenyao [1 ]
Tong, Yanli [1 ]
Meng, Jie [1 ]
Fang, Yahong [1 ]
Dong, Jie [1 ]
Feng, Yitong [1 ]
Xie, Shichang [1 ]
Yang, Qianqian [1 ]
Yang, Hui [1 ]
Wang, Yan [1 ]
Zhang, Junbiao [1 ]
Gu, Haidong [1 ]
Xuan, Hongdong [1 ]
Zou, Guanqing [1 ]
Luo, Chun [1 ]
Huang, Long [1 ]
Yang, Bing [1 ]
Dong, Yachen [1 ]
Zhao, Jianhua [1 ]
Han, Jichen [1 ]
Zhang, Xianglin [1 ]
Huang, Huasheng [1 ]
机构
[1] Shanghai Majorbio Biopharm Technol Co Ltd, Shanghai 201318, Peoples R China
来源
IMETA | 2022年 / 1卷 / 02期
关键词
TOOLS;
D O I
10.1002/imt2.12
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
引用
收藏
页数:7
相关论文
共 20 条
[1]   CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database [J].
Alcock, Brian P. ;
Raphenya, Amogelang R. ;
Lau, Tammy T. Y. ;
Tsang, Kara K. ;
Bouchard, Megane ;
Edalatmand, Arman ;
Huynh, William ;
Nguyen, Anna-Lisa, V ;
Cheng, Annie A. ;
Liu, Sihan ;
Min, Sally Y. ;
Miroshnichenko, Anatoly ;
Tran, Hiu-Ki ;
Werfalli, Rafik E. ;
Nasir, Jalees A. ;
Oloni, Martins ;
Speicher, David J. ;
Florescu, Alexandra ;
Singh, Bhavya ;
Faltyn, Mateusz ;
Hernandez-Koutoucheva, Anastasia ;
Sharma, Arjun N. ;
Bordeleau, Emily ;
Pawlowski, Andrew C. ;
Zubyk, Haley L. ;
Dooley, Damion ;
Griffiths, Emma ;
Maguire, Finlay ;
Winsor, Geoff L. ;
Beiko, Robert G. ;
Brinkman, Fiona S. L. ;
Hsiao, William W. L. ;
Domselaar, Gary, V ;
McArthur, Andrew G. .
NUCLEIC ACIDS RESEARCH, 2020, 48 (D1) :D517-D525
[2]   Comparison of Whole Genome (wg-) and Core Genome (cg-) MLST (BioNumericsTM) Versus SNP Variant Calling for Epidemiological Investigation ofPseudomonas aeruginosa [J].
Blanc, Dominique S. ;
Magalhaes, Barbara ;
Koenig, Isabelle ;
Senn, Laurence ;
Grandbastien, Bruno .
FRONTIERS IN MICROBIOLOGY, 2020, 11
[3]   The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities [J].
Chen, I-Min A. ;
Chu, Ken ;
Palaniappan, Krishnaveni ;
Ratner, Anna ;
Huang, Jinghua ;
Huntemann, Marcel ;
Hajek, Patrick ;
Ritter, Stephan ;
Varghese, Neha ;
Seshadri, Rekha ;
Roux, Simon ;
Woyke, Tanja ;
Eloe-Fadrosh, Emiley A. ;
Ivanova, Natalia N. ;
Kyrpides, Nikos C. .
NUCLEIC ACIDS RESEARCH, 2021, 49 (D1) :D751-D763
[4]   ImageGP: An easy-to-use data visualization web server for scientific researchers [J].
Chen, Tong ;
Liu, Yong-Xin ;
Huang, Luqi .
IMETA, 2022, 1 (01)
[5]   EVenn: Easy to create repeatable and editable Venn diagrams and Venn networks online [J].
Chen, Tong ;
Zhang, Haiyan ;
Liu, Yu ;
Liu, Yong-Xin ;
Huang, Luqi .
JOURNAL OF GENETICS AND GENOMICS, 2021, 48 (09) :863-866
[6]  
Croft D, 2014, NUCLEIC ACIDS RES, V42, pD472, DOI [10.1093/nar/gkt1102, 10.1093/nar/gkz1031]
[7]   Qiita: rapid, web-enabled microbiome meta-analysis [J].
Gonzalez, Antonio ;
Navas-Molina, Jose A. ;
Kosciolek, Tomasz ;
McDonald, Daniel ;
Vazquez-Baeza, Yoshiki ;
Ackermann, Gail ;
DeReus, Jeff ;
Janssen, Stefan ;
Swafford, Austin D. ;
Orchanian, Stephanie B. ;
Sanders, Jon G. ;
Shorenstein, Joshua ;
Holste, Hannes ;
Petrus, Semar ;
Robbins-Pianka, Adam ;
Brislawn, Colin J. ;
Wang, Mingxun ;
Rideout, Jai Ram ;
Bolyen, Evan ;
Dillon, Matthew ;
Caporaso, J. Gregory ;
Dorrestein, Pieter C. ;
Knight, Rob .
NATURE METHODS, 2018, 15 (10) :796-+
[8]  
Jolley Keith A, 2018, Wellcome Open Res, V3, P124, DOI 10.12688/wellcomeopenres.14826.1
[9]   BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences [J].
Kanehisa, Minoru ;
Sato, Yoko ;
Morishima, Kanae .
JOURNAL OF MOLECULAR BIOLOGY, 2016, 428 (04) :726-731
[10]  
Keegan KP, 2016, METHODS MOL BIOL, V1399, P207, DOI 10.1007/978-1-4939-3369-3_13