THEORETICAL-STUDIES ON HYDROGEN-BONDING INTERACTIONS BETWEEN PEPTIDE UNITS

被引:11
作者
AIDA, M
机构
关键词
D O I
10.1246/bcsj.66.3423
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The hydrogen bonding interaction energies between peptide units were calculated using the ab initio MO method with the STO-3G, 7,3/2,1 and 6-31G basis sets and a correction of the basis set superposition errors (BSSE). The same systems were also investigated using an ab initio potential which has recently been developed and the AMBER potential, which is widely used. The energy profiles calculated using the ab initio potential are similar to those calculated using the 6-31G basis set. The distance and angle dependencies of the hydrogen bonding interactions are well represented by the ab initio potential. In contrast, they are not reproduced by the AMBER potential.
引用
收藏
页码:3423 / 3429
页数:7
相关论文
共 25 条
[1]   ABINITIO FORCE-FIELD FOR SIMULATIONS OF PROTEINS AND NUCLEIC-ACIDS [J].
AIDA, M ;
CORONGIU, G ;
CLEMENTI, E .
INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, 1992, 42 (05) :1353-1381
[2]   CALCULATION OF SMALL MOLECULAR INTERACTIONS BY DIFFERENCES OF SEPARATE TOTAL ENERGIES - SOME PROCEDURES WITH REDUCED ERRORS [J].
BOYS, SF ;
BERNARDI, F .
MOLECULAR PHYSICS, 1970, 19 (04) :553-&
[3]  
CLEMENTI E, 1980, LECTURE NOTES CHEM, V19
[4]  
CLEMENTI E, 1990, MODERN TECHNIQUES CO, pCH7
[5]  
CLEMENTI E, 1990, MODERN TECHNIQUES CO, pCH17
[6]  
DUPUIS M, HONDO 7
[7]  
DUPUIS M, 1990, MOTECC 90 MODERN TEC, pCH6
[8]  
Hehre W. J., 1986, AB INITIO MOL ORBITA, P226
[9]   SELF-CONSISTENT MOLECULAR-ORBITAL METHODS .I. USE OF GAUSSIAN EXPANSIONS OF SLATER-TYPE ATOMIC ORBITALS [J].
HEHRE, WJ ;
STEWART, RF ;
POPLE, JA .
JOURNAL OF CHEMICAL PHYSICS, 1969, 51 (06) :2657-+
[10]   SELF-CONSISTENT MOLECULAR-ORBITAL METHODS .12. FURTHER EXTENSIONS OF GAUSSIAN-TYPE BASIS SETS FOR USE IN MOLECULAR-ORBITAL STUDIES OF ORGANIC-MOLECULES [J].
HEHRE, WJ ;
DITCHFIELD, R ;
POPLE, JA .
JOURNAL OF CHEMICAL PHYSICS, 1972, 56 (05) :2257-+