Draft Genome Sequence of a Sulfate-Reducing Bacterium, "Desulfofundulus salinum" 435(T), Isolated from a High-Temperature Gas Field in Russia

被引:2
作者
Grouzdev, Denis S. [1 ]
Bidzhieva, Salimat K. [2 ]
Tourova, Tatiyana P. [2 ]
Krutkina, Maria S. [1 ]
Poltaraus, Andrey B. [3 ]
Nazina, Tamara N. [2 ]
机构
[1] Russian Acad Sci, Res Ctr Biotechnol, Inst Bioengn, Moscow, Russia
[2] Russian Acad Sci, Res Ctr Biotechnol, Winogradsky Inst Microbiol, Moscow, Russia
[3] Russian Acad Sci, Engelhardt Inst Mol Biol, Moscow, Russia
基金
俄罗斯科学基金会;
关键词
D O I
10.1128/MRA.01408-18
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The draft genome sequence of the thermophilic sulfate-reducing bacterium "Desulfofundulus salinum" strain 435(T), isolated from condensate water of the Igrim high-temperature gas field (Western Siberia, Russia), is presented here. The genome is annotated to elucidate the taxonomic position of strain 435(T).
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页数:3
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共 19 条
[1]  
Andrews S., 2010, FASTQC QUALITY CONTR, P370, DOI DOI 10.1109/HPCS.2010.5547068
[2]   Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison [J].
Auch, Alexander F. ;
von Jan, Mathias ;
Klenk, Hans-Peter ;
Goeker, Markus .
STANDARDS IN GENOMIC SCIENCES, 2010, 2 (01) :117-134
[3]   Desulfotomaculum spp. and related gram-positive sulfate-reducing bacteria in deep subsurface environments [J].
Auello, Thomas ;
Ranchou-Peyruse, Anthony ;
Ollivier, Bernard ;
Magot, Michel .
FRONTIERS IN MICROBIOLOGY, 2013, 4
[4]   SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing [J].
Bankevich, Anton ;
Nurk, Sergey ;
Antipov, Dmitry ;
Gurevich, Alexey A. ;
Dvorkin, Mikhail ;
Kulikov, Alexander S. ;
Lesin, Valery M. ;
Nikolenko, Sergey I. ;
Son Pham ;
Prjibelski, Andrey D. ;
Pyshkin, Alexey V. ;
Sirotkin, Alexander V. ;
Vyahhi, Nikolay ;
Tesler, Glenn ;
Alekseyev, Max A. ;
Pevzner, Pavel A. .
JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) :455-477
[5]   Trimmomatic: a flexible trimmer for Illumina sequence data [J].
Bolger, Anthony M. ;
Lohse, Marc ;
Usadel, Bjoern .
BIOINFORMATICS, 2014, 30 (15) :2114-2120
[6]   MEDUSA: a multi-draft based scaffolder [J].
Bosi, Emanuele ;
Donati, Beatrice ;
Galardini, Marco ;
Brunetti, Sara ;
Sagot, Marie-France ;
Lio, Pietro ;
Crescenzi, Pierluigi ;
Fani, Renato ;
Fondi, Marco .
BIOINFORMATICS, 2015, 31 (15) :2443-2451
[7]  
Chun J, 2018, INT J SYST EVOL MICR, V68, P461, DOI [10.1099/ijsem.0.002532, 10.1099/ijsem.0.002516]
[8]   Spider phylogenomics: untangling the Spider Tree of Life [J].
Garrison, Nicole L. ;
Rodriguez, Juanita ;
Agnarsson, Ingi ;
Coddington, Jonathan A. ;
Griswold, Charles E. ;
Hamilton, Christopher A. ;
Hedin, Marshal ;
Kocot, Kevin M. ;
Ledford, Joel M. ;
Bond, Jason E. .
PEERJ, 2016, 4
[9]   Methanogenic Degradation of Petroleum Hydrocarbons in Subsurface Environments: Remediation, Heavy Oil Formation, and Energy Recovery [J].
Gray, N. D. ;
Sherry, A. ;
Hubert, C. ;
Dolfing, J. ;
Headt, I. M. .
ADVANCES IN APPLIED MICROBIOLOGY, VOL 72, 2010, 72 :137-161
[10]   Description of "Desulfotomaculum nigrificans subsp salinus" as a new species, Desulfotomaculum salinum sp nov. [J].
Nazina, TN ;
Rozanova, EP ;
Belyakova, EV ;
Lysenko, AM ;
Poltaraus, AB ;
Tourova, TP ;
Osipov, GA ;
Belyaev, SS .
MICROBIOLOGY, 2005, 74 (05) :567-574