De novo transcriptome assembly associated with fumonisin production by the rice pathogen Fusarium fujikuroi

被引：1
|
作者：
Guruge, Keerthi S. [1 ,2 ,3 ]
Uegaki, Ryuichi [1 ]
机构：
[1] Natl Agr & Food Res Org, Natl Inst Anim Hlth, Pathol & Pathophysiol Res Div, Kannondai 3-1-5, Tsukuba, Ibaraki 3050856, Japan
[2] Osaka Prefecture Univ, Grad Sch Life & Environm Sci, Osaka, Japan
[3] Univ Southern Queensland, Ctr Crop Hlth, Toowoomba Campus, Toowoomba, Qld 4350, Australia
来源：
DATA IN BRIEF | 2018年 / 18卷
基金：
日本学术振兴会;
关键词：
Fusarium fujikuroi; Fumonisin; Next-generation sequencing; Transcriptome; Gene-expression;
D O I：
10.1016/j.dib.2018.02.072
中图分类号：
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号：
07 ; 0710 ; 09 ;
摘要：
The present study employed a next-generation sequencing method to assemble a de novo transcriptome database designed to distinguish gene expression changes exhibited by the fumonisin-producing fungus Fusarium fujikuroi when grown under 'fumonisin-producing' compared to 'non-fumonisin-producing' conditions. The raw data of this study have been deposited at DNA Data Bank of Japan (DDBJ) under the accession ID DRA006146. (C) 2018 The Authors. Published by Elsevier Inc.
引用
收藏
页码：35 / 39
页数：5
相关论文
共 50 条
  • [1] A Natural Variation of Fumonisin Gene Cluster Associated with Fumonisin Production Difference in Fusarium fujikuroi
    Sultana, Sharmin
    Kitajima, Miha
    Kobayashi, Hironori
    Nakagawa, Hiroyuki
    Shimizu, Masafumi
    Kageyama, Koji
    Suga, Haruhisa
    TOXINS, 2019, 11 (04):
  • [2] Genetic Differentiation Associated with Fumonisin and Gibberellin Production in Japanese Fusarium fujikuroi
    Suga, Haruhisa
    Arai, Mitsuhiro
    Fukasawa, Emi
    Motohashi, Keiichi
    Nakagawa, Hiroyuki
    Tateishi, Hideaki
    Fuji, Shin-ichi
    Shimizu, Masafumi
    Kageyama, Koji
    Hyakumachi, Mitsuro
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2019, 85 (01)
  • [3] Light affects fumonisin production in strains of Fusarium fujikuroi, Fusarium proliferatum, and Fusarium verticillioides isolated from rice
    Matic, Slavica
    Spadaro, Davide
    Prelle, Ambra
    Gullino, Maria Lodovica
    Garibaldi, Angelo
    INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY, 2013, 166 (03) : 515 - 523
  • [4] Comparative transcriptome profiling of resistant and susceptible rice genotypes in response to the seedborne pathogen Fusarium fujikuroi
    Matic, Slavica
    Bagnaresi, Paolo
    Biselli, Chiara
    Orru, Luigi
    Carneiro, Greice Amaral
    Siciliano, Ilenia
    Vale, Giampiero
    Gullino, Maria Lodovica
    Spadaro, Davide
    BMC GENOMICS, 2016, 17
  • [5] Comparative transcriptome profiling of resistant and susceptible rice genotypes in response to the seedborne pathogen Fusarium fujikuroi
    Slavica Matić
    Paolo Bagnaresi
    Chiara Biselli
    Luigi Orru’
    Greice Amaral Carneiro
    Ilenia Siciliano
    Giampiero Valé
    Maria Lodovica Gullino
    Davide Spadaro
    BMC Genomics, 17
  • [6] Phylogenetic analysis, fumonisin production and pathogenicity of Fusarium fujikuroi strains isolated from rice in the Philippines
    Cruz, Alejandra
    Marin, Patricia
    Teresa Gonzalez-Jaen, M.
    Aguilar, Kristel Grace I.
    Cumagun, Christian Joseph R.
    JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, 2013, 93 (12) : 3032 - 3039
  • [7] Interplay between pathway-specific and global regulation of the fumonisin gene cluster in the rice pathogen Fusarium fujikuroi
    Sarah M. Rösler
    Christian M. K. Sieber
    Hans-Ulrich Humpf
    Bettina Tudzynski
    Applied Microbiology and Biotechnology, 2016, 100 : 5869 - 5882
  • [8] Interplay between pathway-specific and global regulation of the fumonisin gene cluster in the rice pathogen Fusarium fujikuroi
    Roesler, Sarah M.
    Sieber, Christian M. K.
    Humpf, Hans-Ulrich
    Tudzynski, Bettina
    APPLIED MICROBIOLOGY AND BIOTECHNOLOGY, 2016, 100 (13) : 5869 - 5882
  • [9] Phylogenetic analysis, fumonisin production, and genetic variability of Fusarium fujikuroi strains isolated from rice in the Philippines
    Cumagun, C. R.
    Gonzalez-Jaen, M.
    Aguilar, K. I.
    Cruz Varona, A.
    Marin, P.
    PHYTOPATHOLOGY, 2012, 102 (07) : 27 - 27
  • [10] Transcriptome Analysis of Early Defenses in Rice against Fusarium fujikuroi
    An-Po Cheng
    Szu-Yu Chen
    Ming-Hsin Lai
    Dong-Hong Wu
    Shih-Shun Lin
    Chieh-Yi Chen
    Chia-Lin Chung
    Rice, 2020, 13
12345