THE BEAUTY OF MOLECULAR-SURFACES AS REVEALED BY SELF-ORGANIZING NEURAL NETWORKS

被引:30
作者
GASTEIGER, J
LI, XZ
USCHOLD, A
机构
[1] Organisch-chemisches Institut, Technische Universität München
来源
JOURNAL OF MOLECULAR GRAPHICS | 1994年 / 12卷 / 02期
关键词
MOLECULAR MODELING; ELECTROSTATIC POTENTIAL; SELF-ORGANIZING MAP; NONLINEAR PROJECTION;
D O I
10.1016/0263-7855(94)80073-1
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The Kohonen neural network is a self-organizing network that can be used for the projection of the surface properties of molecules. This allows one to view properties on a molecular surface, like the electrostatic potential in a single picture. These maps are useful for the comparison of molecules and provide a new definition of molecular similarity.
引用
收藏
页码:90 / 97
页数:8
相关论文
共 18 条
[1]  
[Anonymous], 1990, TETRAHED COMP METHOD, DOI DOI 10.1016/0898-5529(90)90156-3
[2]  
CHAU PL, 1987, J MOL GRAPHICS, V5, P97
[3]   SOLVENT-ACCESSIBLE SURFACES OF PROTEINS AND NUCLEIC-ACIDS [J].
CONNOLLY, ML .
SCIENCE, 1983, 221 (4612) :709-713
[4]   CALCULATION OF THE CHARGE-DISTRIBUTION IN CONJUGATED SYSTEMS BY A QUANTIFICATION OF THE RESONANCE CONCEPT [J].
GASTEIGER, J ;
SALLER, H .
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION IN ENGLISH, 1985, 24 (08) :687-689
[5]   ITERATIVE PARTIAL EQUALIZATION OF ORBITAL ELECTRONEGATIVITY - A RAPID ACCESS TO ATOMIC CHARGES [J].
GASTEIGER, J ;
MARSILI, M .
TETRAHEDRON, 1980, 36 (22) :3219-3228
[6]  
GASTEIGER J, UNPUB J AM CHEM SOC
[7]  
GASTEIGER J, 1985, ANGEW CHEM, V97, P699
[8]  
Gasteiger J., 1993, ANGEW CHEM, V105, P510
[9]  
GASTEIGER J, 1993, SOFTWARE DEV CHEM, V7
[10]  
GASTEIGER J, 1993, ANGEW CHEM INT EDIT, V32, P502