COMPARISON OF PARTIAL DENATURATION MAPS WITH THE KNOWN SEQUENCE OF SIMIAN VIRUS-40 AND PHI-X174 REPLICATIVE FORM DNA

被引:35
作者
FUNNELL, BE [1 ]
INMAN, RB [1 ]
机构
[1] UNIV WISCONSIN,DEPT BIOCHEM,MADISON,WI 53706
关键词
D O I
10.1016/0022-2836(79)90079-2
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Electron microscope partial denaturation maps of two viral DNAs, simian virus 40 and φX174 replicative form, have been obtained. A simple computer program has been developed to predict denaturation maps from any given DNA sequence, based on the percentage of A · T base-pairs along the molecule. Maps constructed from the SV40 DNA and φX174 replicative form DNA base sequence show a good correlation with the experimental maps. The results show that the regions of a DNA molecule that denature first are, in fact, those regions with the highest content of adenine and thymine base-pairs. © 1979.
引用
收藏
页码:331 / 340
页数:10
相关论文
共 50 条
[41]   DNA PRIMASE-DNA POLYMERASE-ALPHA FROM SIMIAN CELLS - SEQUENCE SPECIFICITY OF INITIATION SITES ON SIMIAN VIRUS-40 DNA [J].
YAMAGUCHI, M ;
HENDRICKSON, EA ;
DEPAMPHILIS, ML .
MOLECULAR AND CELLULAR BIOLOGY, 1985, 5 (05) :1170-1183
[42]   BACTERIOPHAGE PHI-X174 AND G4 RF DNA REPLICATIVE INTERMEDIATES - COMPARATIVE-STUDY USING DIFFERENT ISOLATION PROCEDURES [J].
BAAS, PD ;
TEERTSTRA, WR ;
VANDERENDE, A ;
JANSZ, HS .
JOURNAL OF MOLECULAR BIOLOGY, 1980, 137 (03) :283-299
[43]   NUCLEOTIDE-SEQUENCE OF J-GENE AND SURROUNDING UNTRANSLATED REGIONS OF PHAGE G4 DNA - COMPARISON WITH PHAGE PHI-X174 [J].
FIDDES, JC ;
GODSON, GN .
CELL, 1978, 15 (03) :1045-1053
[44]   GENE-H SPIKE PROTEIN OF BACTERIOPHAGES PHI-X174 AND S13 .2. RELATION TO SYNTHESIS OF PARENTAL REPLICATIVE FORM [J].
JAZWINSKI, SM ;
MARCO, R ;
KORNBERG, A .
VIROLOGY, 1975, 66 (01) :294-305
[45]   DNA-SEQUENCE STUDIES OF SIMIAN VIRUS-40 CHROMOSOMAL EXCISION AND INTEGRATION IN RAT-CELLS [J].
BULLOCK, P ;
FORRESTER, W ;
BOTCHAN, M .
JOURNAL OF MOLECULAR BIOLOGY, 1984, 174 (01) :55-84
[46]   SEQUENCE SPECIFICITY FOR THE INITIATION OF RNA-PRIMED SIMIAN VIRUS-40 DNA-SYNTHESIS INVIVO [J].
HAY, RT ;
HENDRICKSON, EA ;
DEPAMPHILIS, ML .
JOURNAL OF MOLECULAR BIOLOGY, 1984, 175 (02) :131-157
[47]   MELTING FINE-STRUCTURE OF DNA FRAGMENTS OF KNOWN BASE SEQUENCE FROM PHI X174 [J].
WADA, A ;
TACHIBANA, H ;
UENO, S ;
HUSIMI, Y ;
MACHIDA, Y .
NATURE, 1977, 269 (5626) :352-353
[48]   10 PROTEINS REQUIRED FOR CONVERSION OF PHI-X174 SINGLE-STRANDED-DNA TO DUPLEX FORM INVITRO - RESOLUTION AND RECONSTITUTION [J].
SCHEKMAN, R ;
WEINER, JH ;
WEINER, A ;
KORNBERG, A .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1975, 250 (15) :5859-5865
[49]   CHROMATIN ASSEMBLY - RELATIONSHIP OF CHROMATIN STRUCTURE TO DNA-SEQUENCE DURING SIMIAN VIRUS-40 REPLICATION [J].
TACK, LC ;
WASSARMAN, PM ;
DEPAMPHILIS, ML .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1981, 256 (16) :8821-8828
[50]   A CIS-ACTING SEQUENCE PROMOTES REMOVAL OF SIMIAN VIRUS-40 DNA FROM THE REPLICATION POOL [J].
WANG, HT ;
LARSEN, SH ;
ROMAN, A .
JOURNAL OF VIROLOGY, 1985, 53 (02) :410-414