HOW CLOSE IS CLOSE - 16S RIBOSOMAL-RNA SEQUENCE IDENTITY MAY NOT BE SUFFICIENT TO GUARANTEE SPECIES IDENTITY

被引:1065
作者
FOX, GE [1 ]
WISOTZKEY, JD [1 ]
JURTSHUK, P [1 ]
机构
[1] UNIV HOUSTON, DEPT BIOL, HOUSTON, TX 77204 USA
来源
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY | 1992年 / 42卷 / 01期
关键词
D O I
10.1099/00207713-42-1-166
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
16S rRNA (genes coding for rRNA) sequence comparisons were conducted with the following three psychrophilic strains: Bacillus globisporus W25T (T = type strain) and Bacillus psychrophilus W16A(T), and W5. These strains exhibited more than 99.5% sequence identity and within experimental uncertainty could be regarded as identical. Their close taxonomic relationship was further documented by phenotypic similarities. In contrast, previously published DNA-DNA hybridization results have convincingly established that these strains do not belong to the same species if current standards are used. These results emphasize the important point that effective identity of 16S rRNA sequences is not necessarily a sufficient criterion to guarantee species identity. Thus, although 16S rRNA sequences can be used routinely to distinguish and establish relationships between genera and well-resolved species, very recently diverged species may not be recognizable.
引用
收藏
页码:166 / 170
页数:5
相关论文
共 30 条
  • [1] COMPARATIVE-ANALYSIS OF BACILLUS-ANTHRACIS, BACILLUS-CEREUS, AND RELATED SPECIES ON THE BASIS OF REVERSE-TRANSCRIPTASE SEQUENCING OF 16S RIBOSOMAL-RNA
    ASH, C
    FARROW, JAE
    DORSCH, M
    STACKEBRANDT, E
    COLLINS, MD
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1991, 41 (03): : 343 - 346
  • [2] Ausubel FM., 1995, MOL REPROD DEV, V3rd edn, DOI DOI 10.1002/MRD.1080010210
  • [3] BAESS I, 1983, ACTA PATH MICRO IM B, V91, P201
  • [4] PHYLOGENETIC ANALYSIS AND IDENTIFICATION OF DIFFERENT SEROVARS OF MYCOBACTERIUM-INTRACELLULARE AT THE MOLECULAR-LEVEL
    BODDINGHAUS, B
    WOLTERS, J
    HEIKENS, W
    BOTTGER, EC
    [J]. FEMS MICROBIOLOGY LETTERS, 1990, 70 (02) : 197 - 204
  • [5] Claus D., 1989, Bacillus., P5
  • [6] 16S RIBOSOMAL RIBONUCLEIC-ACID SEQUENCE ANALYSES OF LACTOCOCCI AND RELATED TAXA - DESCRIPTION OF VAGOCOCCUS-FLUVIALIS GEN-NOV, SP-NOV
    COLLINS, MD
    ASH, C
    FARROW, JAE
    WALLBANKS, S
    WILLIAMS, AM
    [J]. JOURNAL OF APPLIED BACTERIOLOGY, 1989, 67 (04): : 453 - 460
  • [7] FOX GM, UNPUB
  • [8] Gordon R., 1981, AEROBIC ENDOSPORE FO, P1
  • [9] Gordon RE, 1973, USDA HDB, V427
  • [10] RESTRICTION SITE POLYMORPHISM OF RIBOSOMAL RIBONUCLEIC-ACID GENE SETS IN MEMBERS OF THE GENUS BACILLUS
    GOTTLIEB, P
    RUDNER, R
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1985, 35 (03): : 244 - 252