SIZE AND CONNECTIVITY AS EMERGENT PROPERTIES OF A DEVELOPING IMMUNE NETWORK

被引:101
作者
DEBOER, RJ
PERELSON, AS
机构
[1] Theoretical Division, Los Alamos, NM 87545
关键词
D O I
10.1016/S0022-5193(05)80313-3
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The development of the immune repertoire during neonatal life involves a strong selection process among different clones. The immune system is genetically capable of producing a much more diverse set of lymphocyte receptors than are expressed in the actual repertoire. By means of a model we investigate the hypothesis that repertoire selection is carried out during early life by the immune network. We develop a model network in which possibly hundreds of B cell clones proliferate and produce antibodies following stimulation. Stimulation is viewed as occurring through receptor crosslinking and is modeled via a log bell-shaped dose-response function. Through secretion of free antibody B cell clones can stimulate one another if their receptors have complementary shapes. Receptor shapes are modeled as binary strings and complementarity is evaluated by a string matching algorithm. The dynamic behavior of our model is typically oscillatory and for some parameters chaotic. In the case of two complementary B cell clones, the chaotic attractor has a number of features in common with the Lorenz attractor. The networks we model do not have a predetermined size or topology. Rather, we model the bone marrow as a source which generates novel clones. These novel clones can either be incorporated into the network or remain isolated, mimicking the non-network portion of the immune system. Clones are removed from the network if they fail to expand. We investigate the properties of the network as a function of P(match), the probability that two randomly selected immunoglobulins have complementary shapes. As the model networks evolve they develop a number of self-regulatory features. Most importantly, networks attain a specific equilibrium size and generate a characteristic amount of "natural" antibody. Because the network reaches an asymptotic size even though the bone marrow keeps supplying novel clones, clones must compete for presence in the network, i.e. repertoire selection takes place. Networks comprised of cells with multireactive receptors remain small, whereas networks consisting of cells with specific receptors become much larger. We find an inverse relationship between n, the number of clones in a network, and P(match), and a linear relationship between nand M, the rate at which novel clones are produced in the bone marrow. We present a simple phenomenological model for the number of clones in the network that accounts for the inverse relationship between nand P(match), and that can account for the relationship between nand M. Additionally, the phenomenological model suggests that there are two qualitatively different network equilibria. The number of clones a given clone interacts with, its connectivity, is another emergent property of these networks. During early ontogeny, before the network reaches its equilibrium size, the connectivity may become very high. Within a few months however, networks attain a degree of connectivity that is hardly dependent on the matching probability of the receptors. The networks appear to select for specificity: the average connectivity always remains lower than expected, and the selection process favors adding novel specific clones over maintaining established multireactive ones. We discuss the "dominance" of specificity, and the fact that the connectivity is lower than expected because clones tend to occupy similar regions in shape space. The rate at which antibodies in solution are removed from the system by forming idiotypic complexes, and the parameter in the dose-response curve determining the onset of suppression, turn out to be the most crucial parameters of the model. To summarize, we show how an immune network could select a limited actual repertoire from a seemingly infinite source of novelty from the bone marrow. © 1991 Academic Press Limited.
引用
收藏
页码:381 / 424
页数:44
相关论文
共 79 条
  • [1] ADAM G, 1978, THEORETICAL IMMUNOLO, P603
  • [2] CLONAL GROWTH AND MATURATION TO IMMUNOGLOBULIN SECRETION INVITRO OF EVERY GROWTH-INDUCIBLE B LYMPHOCYTE
    ANDERSSON, J
    COUTINHO, A
    LERNHARDT, W
    MELCHERS, F
    [J]. CELL, 1977, 10 (01) : 27 - 34
  • [3] MODELING ADAPTIVE BIOLOGICAL-SYSTEMS
    BAGLEY, RJ
    FARMER, JD
    KAUFFMAN, SA
    PACKARD, NH
    PERELSON, AS
    STADNYK, IM
    [J]. BIOSYSTEMS, 1989, 23 (2-3) : 113 - 138
  • [4] THE DYNAMIC NATURE OF THE ANTIBODY REPERTOIRE
    BEREK, C
    MILSTEIN, C
    [J]. IMMUNOLOGICAL REVIEWS, 1988, 105 : 5 - 26
  • [5] BEREK C, 1985, NATURE, V316, P314
  • [6] BONA CA, 1988, ANNU REV IMMUNOL, V6, P327, DOI 10.1146/annurev.iy.06.040188.001551
  • [7] REGULATION OF AUTOIMMUNE-DISEASE PHYSIOLOGICAL AND THERAPEUTIC
    COHEN, IR
    [J]. IMMUNOLOGICAL REVIEWS, 1986, 94 : 5 - 21
  • [8] SPECIFIC SUPPRESSION OF ANTIBODY-RESPONSE BY ANTIBODIES TO RECEPTORS
    COSENZA, H
    KOHLER, H
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1972, 69 (09) : 2701 - &
  • [9] BEYOND CLONAL SELECTION AND NETWORK
    COUTINHO, A
    [J]. IMMUNOLOGICAL REVIEWS, 1989, 110 : 63 - 87
  • [10] A FUNCTIONAL IDIOTYPIC NETWORK OF T-HELPER CELLS AND ANTIBODIES, LIMITED TO THE COMPARTMENT OF NATURALLY ACTIVATED LYMPHOCYTES IN NORMAL MICE
    COUTINHO, A
    MARQUEZ, C
    ARAUJO, PMF
    PEREIRA, P
    TORIBIO, ML
    MARCOS, MAR
    MARTINEZ, C
    [J]. EUROPEAN JOURNAL OF IMMUNOLOGY, 1987, 17 (06) : 821 - 825