Draft Genome Sequence and Gene Annotation of Stemphylium lycopersici Strain CIDEFI-216

被引:21
作者
Franco, Mario E. E. [1 ]
Lopez, Silvina [2 ]
Medina, Rocio [3 ]
Saparrat, Mario C. N. [2 ,4 ,5 ]
Balatti, Pedro [1 ,5 ]
机构
[1] Univ Nacl La Plata, Fac Ciencias Agr & Forestales, Ctr Invest Fitopatol CIDEFI CICBA, La Plata, Buenos Aires, Argentina
[2] Univ Nacl La Plata, Fac Ciencias Nat & Museo, Fac Ciencias Agr & Forestales, Inst Fisiol Vegetal INFIVE,CCT La Plata,CONICET, La Plata, Buenos Aires, Argentina
[3] Univ Nacl La Plata, Fac Ciencias Exactas, Ctr Invest & Desarrollo Fermentac Ind CINDEFI, CCT La Plata,CONICET, La Plata, Buenos Aires, Argentina
[4] Univ Nacl La Plata, Fac Ciencias Nat & Museo, Inst Carlos Spegazzini, La Plata, Buenos Aires, Argentina
[5] Univ Nacl La Plata, Fac Ciencias Nat & Museo, Fac Ciencias Agr & Forestales, Catedra Microbiol Agr, La Plata, Buenos Aires, Argentina
关键词
D O I
10.1128/genomeA.01069-15
中图分类号
学科分类号
摘要
Stemphylium lycopersici is a plant-pathogenic fungus that is widely distributed throughout the world. In tomatoes, it is one of the etiological agents of gray leaf spot disease. Here, we report the first draft genome sequence of S. lycopersici, including its gene structure and functional annotation.
引用
收藏
页数:2
相关论文
共 21 条
[1]   Phylogeny of Stemphylium spp. based on ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences [J].
Câmara, MPS ;
O'Neill, NR ;
van Berkum, P .
MYCOLOGIA, 2002, 94 (04) :660-672
[2]   Blast2GO:: a universal tool for annotation, visualization and analysis in functional genomics research [J].
Conesa, A ;
Götz, S ;
García-Gómez, JM ;
Terol, J ;
Talón, M ;
Robles, M .
BIOINFORMATICS, 2005, 21 (18) :3674-3676
[3]   Bioactive Metabolites from the Endophytic Fungus Stemphylium globuliferum Isolated from Mentha pulegium [J].
Debbab, Abdessamad ;
Aly, Amal H. ;
Edrada-Ebel, RuAngelie ;
Wray, Victor ;
Mueller, Werner E. G. ;
Totzke, Frank ;
Zirrgiebel, Ute ;
Schaechtele, Christoph ;
Kubbutat, Michael H. G. ;
Lin, Wen Han ;
Mosaddak, Mahjouba ;
Hakiki, Abdelhak ;
Proksch, Peter ;
Ebel, Rainer .
JOURNAL OF NATURAL PRODUCTS, 2009, 72 (04) :626-631
[4]   Profile hidden Markov models [J].
Eddy, SR .
BIOINFORMATICS, 1998, 14 (09) :755-763
[5]  
ELLIS M B, 1971, P608
[6]  
Ellis MB, 1975, CMI DESCRIPT PATHOG, V471, P1
[7]  
Enjoji S, 1931, J PLANT PROT, V18, P48
[8]  
Farr D. F., 1989, Fungi on plants and plant products in the United States.
[9]  
Farr DF, FUNGAL DATABASES QUI
[10]   Identification of ribosomal RNA genes in metagenomic fragments [J].
Huang, Ying ;
Gilna, Paul ;
Li, Weizhong .
BIOINFORMATICS, 2009, 25 (10) :1338-1340