Draft Genome Sequence of Fonsecaea nubica Strain CBS 269.64, Causative Agent of Human Chromoblastomycosis

被引：2

作者：

Costa, Flavia F. ^{[1
]}

de Hoog, Sybren ^{[2
,5
]}

Raittz, Roberto T. ^{[3
]}

Weiss, Inicius A. ^{[3
]}

Leao, Aniele C. R. ^{[3
]}

Bombassaro, Amanda ^{[2
]}

Sun, Jiufeng ^{[4
]}

Moreno, Leandro F. ^{[2
,5
]}

Souza, Emanuel M. ^{[3
,6
]}

Pedrosa, Fabio O. ^{[3
,6
]}

Steffens, Maria Berenice R. ^{[3
,6
]}

Baura, Valter ^{[6
]}

Tadra-Sfeir, Michele Z. ^{[6
]}

Balsanelli, Eduardo ^{[6
]}

Najafzadeh, M. Javad ^{[7
]}

Gomes, Renata R. ^{[2
]}

Felipe, Maria S. ^{[8
]}

Teixeira, Marcus ^{[9
]}

Santos, Germana D. ^{[2
]}

Xi, Liyan ^{[10
]}

Alves de Castro, Mauro Antonio ^{[3
]}

Vicente, Varna A. ^{[1
,2
]}

机构：

[1] Univ Fed Parana, Dept Bioproc Engn & Biotechnol, Engn Bioproc & Biotechnol Postgrad Program, Curitiba, Parana, Brazil

[2] Univ Fed Parana, Dept Pathol, Microbiol Parasitol & Pathol Postgrad Program, Curitiba, Parana, Brazil

[3] Univ Fed Parana, Lab Bioinformat, Profess & Technol Educ Sect, Curitiba, Parana, Brazil

[4] Guangdong Prov Ctr Dis Control & Prevent, Guangdong Prov Inst Publ Hlth, Guangzhou, Guangdong, Peoples R China

[5] CBS KNAW Fungal Biodivers Ctr, Utrecht, Netherlands

[6] Univ Fed Parana, Dept Biochem, Curitiba, Parana, Brazil

[7] Mashhad Univ Med Sci, Sch Med, Dept Parasitol & Mycol, Mashhad, Iran

[8] Catholic Univ Brasilia UCB, Brasilia, DF, Brazil

[9] Translat Genom Res Inst, Div Pathogen Genom, Flagstaff, AZ USA

[10] Sun Yat Sen Univ, Dept Dermatol, Guangzhou, Guangdong, Peoples R China

来源：

GENOME ANNOUNCEMENTS | 2016年 / 4卷 / 04期

关键词：

D O I：

10.1128/genomeA.00735-16

中图分类号：

学科分类号：

摘要：

On the basis of multilocus phylogenetic data, Fonsecaea nubica was described in 2010 as a molecular sibling of F. monophora, an established agent of the human skin disease chomoblastomycosis in tropical zones. Genome analysis of these pathogens is mandatory to identify genes involved in the interaction with host and virulence.

引用

页数：2

共 19 条

[1] Biodiversity of the genus Cladophialophora
Badali, H.
Gueidan, C.
Najafzadeh, M. J.
Bonifaz, A.
Van den Ende, A. H. G. Gerrits
de Hoog, G. S.
[J]. STUDIES IN MYCOLOGY, 2008, (61) : 175 - 191
[2] SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Bankevich, Anton
Nurk, Sergey
Antipov, Dmitry
Gurevich, Alexey A.
Dvorkin, Mikhail
Kulikov, Alexander S.
Lesin, Valery M.
Nikolenko, Sergey I.
Son Pham
Prjibelski, Andrey D.
Pyshkin, Alexey V.
Sirotkin, Alexander V.
Vyahhi, Nikolay
Tesler, Glenn
Alekseyev, Max A.
Pevzner, Pavel A.
[J]. JOURNAL OF COMPUTATIONAL BIOLOGY, 2012, 19 (05) : 455 - 477
[3] Chromoblastomycosis:: clinical and mycologic experience of 51 cases
Bonifaz, A
Carrasco-Gerard, E
Saúl, A
[J]. MYCOSES, 2001, 44 (1-2) : 1 - 7
[4] Molecular ecology and pathogenic potential of Fonsecaea species
de Hoog, GS
Attili-Angelis, D
Vicente, VA
Van den Ende, AHGG
Queiroz-Telles, F
[J]. MEDICAL MYCOLOGY, 2004, 42 (05) : 405 - 416
[5] De Hoog GS, 2000, MED MYCOL, V38, P243, DOI 10.1080/mmy.38.s1.243.250
[6] PHIALEMONIUM, A NEW ANAMORPH GENUS INTERMEDIATE BETWEEN PHIALOPHORA AND ACREMONIUM
GAMS, W
MCGINNIS, MR
[J]. MYCOLOGIA, 1983, 75 (06) : 977 - 987
[7] Hoog D., 2016, ATLAS CLIN FUNGI ULT
[8] InterProScan 5: genome-scale protein function classification
Jones, Philip
Binns, David
Chang, Hsin-Yu
Fraser, Matthew
Li, Weizhong
McAnulla, Craig
McWilliam, Hamish
Maslen, John
Mitchell, Alex
Nuka, Gift
Pesseat, Sebastien
Quinn, Antony F.
Sangrador-Vegas, Amaia
Scheremetjew, Maxim
Yong, Siew-Yit
Lopez, Rodrigo
Hunter, Sarah
[J]. BIOINFORMATICS, 2014, 30 (09) : 1236 - 1240
[9] ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences
Laslett, D
Canback, B
[J]. NUCLEIC ACIDS RESEARCH, 2004, 32 (01) : 11 - 16
[10] Chromobtastomycosis
Martinez, Ruben Lopez
Mendez Tovar, Luis Javier
[J]. CLINICS IN DERMATOLOGY, 2007, 25 (02) : 188 - 194

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