Assessment of MALDI-TOF MS as alternative tool for Streptococcus suis identification

被引:21
作者
Perez-Sancho, Marta [1 ,2 ]
Isabel Vela, Ana [1 ,3 ]
Garcia-Seco, Teresa [1 ]
Gottschalk, Marcelo [4 ]
Dominguez, Lucas [1 ,2 ,3 ]
Francisco Fernandez-Garayzabal, Jose [1 ,3 ]
机构
[1] Univ Complutense, Ctr Vigilancia Sanitaria Vet VISAVET, Ave Puerta de Hierro S-N, E-28040 Madrid, Spain
[2] UCM, UPM, Madrid, Spain
[3] Univ Complutense, Fac Vet, Dept Sanidad Anim, Madrid, Spain
[4] Univ Montreal, Fac Med Vet, Grp Rech Sur Malad Infect Porc, St Hyacinthe, PQ, Canada
关键词
identification; MALDI-TOF MS; Streptococcus suis; PCR; biochemical tests;
D O I
10.3389/fpubh.2015.00202
中图分类号
R1 [预防医学、卫生学];
学科分类号
1004 ; 120402 ;
摘要
The accuracy of matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) for identifying Streptococcus suis isolates obtained from pigs, wild animals, and humans was evaluated using a PCR-based identification assay as the gold standard. In addition, MALDI-TOF MS was compared with the commercial multi-tests Rapid ID 32 STREP system. From the 129 S. suis isolates included in the study and identified by the molecular method, only 31 isolates (24.03%) had score values >= 2.300 and 79 isolates (61.24%) gave score values between 2.299 and 2.000. After updating the currently available S. suis MALDI Biotyper database with the spectra of three additional clinical isolates of serotypes 2, 7, and 9, most isolates had statistically significant higher score values (mean score: 2.65) than those obtained using the original database (mean score: 2.182). Considering the results of the present study, we suggest using a less restrictive threshold score of >= 2.000 for reliable species identification of S. suis. According to this cut-off value, a total of 125 S. suis isolates (96.9%) were correctly identified using the updated database. These data indicate an excellent performance of MALDI-TOF MS for the identification of S. suis.
引用
收藏
页数:6
相关论文
共 28 条
[1]   Comparison of Direct Colony Method versus Extraction Method for Identification of Gram-Positive Cocci by Use of Bruker Biotyper Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry [J].
Alatoom, Adnan A. ;
Cunningham, Scott A. ;
Ihde, Sherry M. ;
Mandrekar, Jayawant ;
Patel, Robin .
JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (08) :2868-2873
[2]   Comparison of the Bruker MALDI-TOF Mass Spectrometry System and Conventional Phenotypic Methods for Identification of Gram-Positive Rods [J].
Barberis, Claudia ;
Almuzara, Marisa ;
Join-Lambert, Olivier ;
Soledad Ramirez, Maria ;
Famiglietti, Angela ;
Vay, Carlos .
PLOS ONE, 2014, 9 (09)
[3]   Performance of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Bacterial Strains Routinely Isolated in a Clinical Microbiology Laboratory [J].
Bizzini, A. ;
Durussel, C. ;
Bille, J. ;
Greub, G. ;
Prod'hom, G. .
JOURNAL OF CLINICAL MICROBIOLOGY, 2010, 48 (05) :1549-1554
[4]   Evaluation of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Rapid Identification of Beta-Hemolytic Streptococci [J].
Cherkaoui, Abdessalam ;
Emonet, Stephane ;
Fernandez, Jose ;
Schorderet, Didier ;
Schrenzel, Jacques .
JOURNAL OF CLINICAL MICROBIOLOGY, 2011, 49 (08) :3004-3005
[5]   STREPTOCOCCI AND ENTEROCOCCI ASSOCIATED WITH TONSILS OF CATTLE [J].
COLQUE, JIC ;
DEVRIESE, LA ;
HAESEBROUCK, F .
LETTERS IN APPLIED MICROBIOLOGY, 1993, 16 (02) :72-74
[6]   Evaluation of sample preparation methods for MALDI-TOF MS identification of highly dangerous bacteria [J].
Drevinek, M. ;
Dresler, J. ;
Klimentova, J. ;
Pisa, L. ;
Hubalek, M. .
LETTERS IN APPLIED MICROBIOLOGY, 2012, 55 (01) :40-46
[7]  
Gottschalk M., 2012, DIS SWINE, V10th ed., P841
[8]  
Gottschalk Marcelo, 2007, Animal Health Research Reviews, V8, P29, DOI 10.1017/S1466252307001247
[9]   Characterization of Streptococcus suis isolates recovered between 2008 and 2011 from diseased pigs in Quebec, Canada [J].
Gottschalk, Marcelo ;
Lacouture, Sonia ;
Bonifait, Laetitia ;
Roy, David ;
Fittipaldi, Nahuel ;
Grenier, Daniel .
VETERINARY MICROBIOLOGY, 2013, 162 (2-4) :819-825
[10]   Streptococcus suis: a new emerging or an old neglected zoonotic pathogen? [J].
Gottschalk, Marcelo ;
Xu, Jianguo ;
Calzas, Cynthia ;
Segura, Mariela .
FUTURE MICROBIOLOGY, 2010, 5 (03) :371-391