DYNAMIC INFORMATION FROM PROTEIN CRYSTALLOGRAPHY - ANALYSIS OF TEMPERATURE FACTORS FROM REFINEMENT OF THE HEN EGG-WHITE LYSOZYME STRUCTURE

被引:142
作者
STERNBERG, MJE [1 ]
GRACE, DEP [1 ]
PHILLIPS, DC [1 ]
机构
[1] DEP ZOOL,MOL BIOPHYS LAB,S PARKS RD,OXFORD OX1 3PS,ENGLAND
关键词
D O I
10.1016/0022-2836(79)90539-4
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A preliminary analysis is presented of whether the isotropic temperature factors derived from refinement of the tetragonal crystal structure of hen egg-white lysozyme at 2 Å resolution can be interpreted in terms of molecular motion. If the contributions to the temperature factors from experimental errors, crystal disorder and imperfections of the molecular model are neglected, the apparent thermal motion is found to be compatible with the pair of molecules that have the strongest interactions in the crystal either moving as a rigid-body with libration about a common axis, or vibrating in an intramolecular mode with the principal amplitudes radial to this axis. There is only weak evidence for hingebending, i.e. that the two lobes of lysozyme vibrate so that their separation varies. Side-chains that are exposed to the solvent and some segments of the main polypeptide chain (including residues 70-73, 82-84, 101-103) have greater apparent thermal motion than the remainder of the molecule. Although this analysis at a single temperature cannot establish whether thermal motion or static disorder (including conformational variability) underlies the observed effects, it suggests that the accurate determination of temperature factors will be useful in detailed studies of the dynamic properties of macromolecules. © 1979.
引用
收藏
页码:231 / 252
页数:22
相关论文
共 41 条
  • [1] CRYSTAL-STRUCTURE OF ELASTASE-SUBSTRATE COMPLEX AT -55DEGREESC
    ALBER, T
    PETSKO, GA
    TSERNOGLOU, D
    [J]. NATURE, 1976, 263 (5575) : 297 - 300
  • [2] LINEAR DIFFRACTOMETER
    ARNDT, UW
    PHILLIPS, DC
    [J]. ACTA CRYSTALLOGRAPHICA, 1961, 14 (08): : 807 - &
  • [3] ADAPTATION OF LINEAR DIFFRACTOMETER TO MEASURE 3 X-RAY REFLECTIONS QUASI-SIMULTANEOUSLY
    ARNDT, UW
    PHILLIPS, DC
    NORTH, ACT
    [J]. JOURNAL OF SCIENTIFIC INSTRUMENTS, 1964, 41 (07): : 421 - &
  • [4] BANYARD SE, 1973, THESIS U OXFORD
  • [5] Blake C. C. F., 1962, P S BIOL EFF ION RAD, P183
  • [6] STRUCTURE OF HEN EGG-WHITE LYSOZYME - A 3-DIMENSIONAL FOURIER SYNTHESIS AT 2A RESOLUTION
    BLAKE, CCF
    KOENIG, DF
    MAIR, GA
    NORTH, ACT
    PHILLIPS, DC
    SARMA, VR
    [J]. NATURE, 1965, 206 (4986) : 757 - &
  • [7] ON CONFORMATION OF HEN EGG-WHITE LYSOZYME MOLECULE
    BLAKE, CCF
    MAIR, GA
    NORTH, ACT
    PHILLIPS, DC
    SARMA, VR
    [J]. PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1967, 167 (1009): : 365 - +
  • [8] CRYSTALLOGRAPHIC STUDIES OF ACTIVITY OF HEN EGE-WHITE LYSOZYME
    BLAKE, CCF
    JOHNSON, LN
    MAIR, GA
    NORTH, ACT
    PHILLIPS, DC
    SARMA, VR
    [J]. PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1967, 167 (1009): : 378 - +
  • [9] PHYSICAL ASPECTS OF ENZYME FUNCTIONING
    BLUMENFELD, LA
    [J]. JOURNAL OF THEORETICAL BIOLOGY, 1976, 58 (02) : 269 - 284
  • [10] NUCLEAR MAGNETIC-RESONANCE STUDIES ON STRUCTURE OF LYSOZYME IN SOLUTION
    CAMPBELL, ID
    DOBSON, CM
    WILLIAMS, RJP
    [J]. PROCEEDINGS OF THE ROYAL SOCIETY OF LONDON SERIES A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES, 1975, 345 (1640): : 41 - 59