Isolation and Characterization of Nanobodies against a Zinc-Transporting P-Type ATPase

被引:6
作者
Longhin, Elena [1 ]
Gronberg, Christina [1 ]
Hu, Qiaoxia [1 ]
Duelli, Annette Susanne [1 ]
Andersen, Kasper Rojkjaer [2 ]
Laursen, Nick Stub [2 ]
Gourdon, Pontus [1 ,3 ]
机构
[1] Univ Copenhagen, Dept Biomed Sci, Blegdamsvej 3B, DK-2200 Copenhagen, Denmark
[2] Aarhus Univ, Dept Mol Biol & Genet, Gustav Wieds Vej 10c, DK-8000 Aarhus C, Denmark
[3] Lund Univ, Dept Expt Med Sci, Solvegatan 19, SE-22184 Lund, Sweden
基金
瑞典研究理事会;
关键词
P-type ATPase; nanobody; llama; Zinc-transport; Zinc-transporting P-ATPase; ZntA;
D O I
10.3390/antib7040039
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
P-type ATPases form a large and ubiquitous superfamily of ion and lipid transporters that use ATP (adenosine triphosphate) to carry out their function. The IB subclass (P-IB-ATPases) allows flux of heavy metals and are key players in metal detoxification, critical for human health, crops, and survival of pathogens. Nevertheless, P-IB-ATPases remain poorly understood at a molecular level. In this study, nanobodies (Nbs) are selected against the zinc-transporting P-IB-ATPase ZntA from Shigella sonnei (SsZntA), aiming at developing tools to assist the characterization of the structure and function of this class of transporters. We identify six different Nbs that bind detergent stabilized SsZntA. We further assess the effect of the Nbs on the catalytic function of SsZntA, and find that five nanobodies associate without affecting the function, while one nanobody significantly reduces the ATPase activity. This study paves the way for more refined mechanistical and structural studies of zinc-transporting P-IB-ATPases.
引用
收藏
页数:15
相关论文
共 26 条
[1]   BIOCHEMICAL ASPECTS OF ACTIVE TRANSPORT [J].
ALBERS, RW .
ANNUAL REVIEW OF BIOCHEMISTRY, 1967, 36 :727-+
[2]   Copper-transporting P-type ATPases use a unique ion-release pathway [J].
Andersson, Magnus ;
Mattle, Daniel ;
Sitsel, Oleg ;
Klymchuk, Tetyana ;
Nielsen, Anna Marie ;
Moller, Lisbeth Birk ;
White, Stephen H. ;
Nissen, Poul ;
Gourdon, Pontus .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2014, 21 (01) :43-+
[3]   How do P-type ATPases transport ions? [J].
Apell, HJ .
BIOELECTROCHEMISTRY, 2004, 63 (1-2) :149-156
[4]   Evolution of substrate specificities in the P-type ATPase superfamily [J].
Axelsen, KB ;
Palmgren, MG .
JOURNAL OF MOLECULAR EVOLUTION, 1998, 46 (01) :84-101
[5]   Nanobody Technology: A versatile Toolkit for Microscopic imaging, Protein-Protein interaction Analysis, and Protein Function exploration [J].
Beghein, Els ;
Gettemans, Jan .
FRONTIERS IN IMMUNOLOGY, 2017, 8
[6]   P-type ATPases at a glance [J].
Bublitz, Maike ;
Morth, J. Preben ;
Nissen, Poul .
JOURNAL OF CELL SCIENCE, 2011, 124 (15) :2515-2519
[7]   BeF3- acts as a phosphate analog in proteins phosphorylated on aspartate:: Structure of a BeF3- complex with phosphoserine phosphatase [J].
Cho, H ;
Wang, WR ;
Kim, R ;
Yokota, H ;
Damo, S ;
Kim, SH ;
Wemmer, D ;
Kustu, S ;
Yan, DL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (15) :8525-8530
[8]   Nanobody-based products as research and diagnostic tools [J].
De Meyer, Thomas ;
Muyldermans, Serge ;
Depicker, Ann .
TRENDS IN BIOTECHNOLOGY, 2014, 32 (05) :263-270
[9]   Selection and identification of single domain antibody fragments from camel heavy-chain antibodies [J].
Ghahroudi, MA ;
Desmyter, A ;
Wyns, L ;
Hamers, R ;
Muyldermans, S .
FEBS LETTERS, 1997, 414 (03) :521-526
[10]   SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building [J].
Gouy, Manolo ;
Guindon, Stephane ;
Gascuel, Olivier .
MOLECULAR BIOLOGY AND EVOLUTION, 2010, 27 (02) :221-224