STRUCTURE DETERMINATION OF GLUCOSE-ISOMERASE FROM STREPTOMYCES-MURINUS AT 2.6 ANGSTROM RESOLUTION

被引:10
作者
RASMUSSEN, H
LACOUR, T
NYBORG, J
SCHULEIN, M
机构
[1] AARHUS UNIV,DEPT CHEM,DK-8000 AARHUS,DENMARK
[2] NOVO NORDISK IND A-S,DK-2880 BAGSVAERD,DENMARK
来源
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY | 1994年 / 50卷
关键词
D O I
10.1107/S0907444993009540
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Glucose isomerase from Streptomyces murinus has been crystallized in space group P4(1)2(1)2, cell dimensions a = b = 137.65 and c = 132.20 angstrom. One dimer of the tetrametric molecule is found per asymmetric unit. An initial structure solution was obtained by the molecular replacement method. The crystallographic refinement was performed using molecular dynamics techniques with X-ray restraints. The final crystallographic R value is 21.4% at 2.6 angstrom resolution including 3023 non-H atoms, two metal ions and two water molecules per monomer.
引用
收藏
页码:124 / 131
页数:8
相关论文
共 25 条
[1]   PROTEIN DATA BANK - COMPUTER-BASED ARCHIVAL FILE FOR MACROMOLECULAR STRUCTURES [J].
BERNSTEIN, FC ;
KOETZLE, TF ;
WILLIAMS, GJB ;
MEYER, EF ;
BRICE, MD ;
RODGERS, JR ;
KENNARD, O ;
SHIMANOUCHI, T ;
TASUMI, M .
JOURNAL OF MOLECULAR BIOLOGY, 1977, 112 (03) :535-542
[2]   X-RAY-ANALYSIS OF D-XYLOSE ISOMERASE AT 1.9 A - NATIVE ENZYME IN COMPLEX WITH SUBSTRATE AND WITH A MECHANISM-DESIGNED INACTIVATOR [J].
CARRELL, HL ;
GLUSKER, JP ;
BURGER, V ;
MANFRE, F ;
TRITSCH, D ;
BIELLMANN, JF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (12) :4440-4444
[3]  
CCP4, 1979, CCP4 SUITE PROGRAMS
[4]   MECHANISM FOR ALDOSE-KETOSE INTERCONVERSION BY D-XYLOSE ISOMERASE INVOLVING RING-OPENING FOLLOWED BY A 1,2-HYDRIDE SHIFT [J].
COLLYER, CA ;
HENRICK, K ;
BLOW, DM .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 212 (01) :211-235
[5]  
Crowther R. A., 1972, MOL REPLACEMENT METH, P173
[6]   A METHOD OF POSITIONING A KNOWN MOLECULE IN AN UNKNOWN CRYSTAL STRUCTURE [J].
CROWTHER, RA ;
BLOW, DM .
ACTA CRYSTALLOGRAPHICA, 1967, 23 :544-&
[7]   REFINEMENT OF GLUCOSE-ISOMERASE FROM STREPTOMYCES-ALBUS AT 1.65-A WITH DATA FROM AN IMAGING PLATE [J].
DAUTER, Z ;
TERRY, H ;
WITZEL, H ;
WILSON, KS .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1990, 46 :833-841
[8]   CRYSTALLOGRAPHIC STUDIES OF THE MECHANISM OF XYLOSE ISOMERASE [J].
FARBER, GK ;
GLASFELD, A ;
TIRABY, G ;
RINGE, D ;
PETSKO, GA .
BIOCHEMISTRY, 1989, 28 (18) :7289-7297
[9]   MERLOT, AN INTEGRATED PACKAGE OF COMPUTER-PROGRAMS FOR THE DETERMINATION OF CRYSTAL-STRUCTURES BY MOLECULAR REPLACEMENT [J].
FITZGERALD, PMD .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1988, 21 (03) :273-278
[10]   TESTING THE METHOD OF CRYSTALLOGRAPHIC REFINEMENT USING MOLECULAR-DYNAMICS [J].
FUJINAGA, M ;
GROS, P ;
VANGUNSTEREN, WF .
JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1989, 22 :1-8