SINGLE-STEP SELECTION FOR TY1 ELEMENT RETROTRANSPOSITION

被引:223
|
作者
CURCIO, MJ [1 ]
GARFINKEL, DJ [1 ]
机构
[1] NATL CANC INST,FREDERICK CANC RES & DEV CTR,BASIC RES PROGRAM,ADV BIOSCI LABS,POB B,FREDERICK,MD 21702
关键词
SACCHAROMYCES-CEREVISIAE; REVERSE TRANSCRIPTION; ARTIFICIAL INTRON;
D O I
10.1073/pnas.88.3.936
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The yeast retrotransposon Ty1 has been tagged with a reporter gene that allows selection of RNA-mediated transposition events and is applicable to the study of retroelements in other organisms. The reporter gene is a yeast HIS3 gene interrupted by an artificial intron (AI) in the antisense orientation. The HIS3AI sequences were inserted into a Ty1 element such that the intron is on the sense strand of the Ty1 element; therefore, splicing and retrotransposition of marked Ty1 transcripts can give rise to His+ cells. Fusion of the Ty1-H3mHIS3AI element to the inducible GAL1 promoter resulted in a high frequency of histidine prototrophs upon galactose induction. Moreover, spontaneous His+ revertants derived from strains containing genomic TymHIS3AI elements are a result of retrotransposition. By using this assay, we estimated the Ty1 transposition rate to be between 3 X 10(-7) and 1 X 10(-5) transposition per Ty1 element per generation. Variations in the transposition rate of individual Ty1 elements are correlated with the relative abundance of their transcripts.
引用
收藏
页码:936 / 940
页数:5
相关论文
共 50 条
  • [1] Replication infidelity during a single cycle of Ty1 retrotransposition
    Gabriel, A
    Willems, M
    Mules, EH
    Boeke, JD
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (15) : 7767 - 7771
  • [2] Relationship between RNA lariat debranching and Ty1 element retrotransposition
    Salem, LA
    Boucher, CL
    Menees, TM
    JOURNAL OF VIROLOGY, 2003, 77 (23) : 12795 - 12806
  • [3] A Role for the Budding Yeast Separase, Esp1, in Ty1 Element Retrotransposition
    Ho, Krystina L.
    Ma, Lina
    Cheung, Stephanie
    Manhas, Savrina
    Fang, Nancy
    Wang, Kaiqian
    Young, Barry
    Loewen, Christopher
    Mayor, Thibault
    Measday, Vivien
    PLOS GENETICS, 2015, 11 (03)
  • [4] Post-transcriptional cosuppression of Ty1 retrotransposition
    Garfinkel, DJ
    Nyswaner, K
    Wang, J
    Cho, JY
    GENETICS, 2003, 165 (01) : 83 - 99
  • [5] Posttranslational interference of Ty1 retrotransposition by antisense RNAs
    Matsuda, Emiko
    Garfinkel, David J.
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (37) : 15657 - 15662
  • [6] A RARE TRANSFER RNA-ARG(CCU) THAT REGULATES TY1 ELEMENT RIBOSOMAL FRAMESHIFTING IS ESSENTIAL FOR TY1 RETROTRANSPOSITION IN SACCHAROMYCES-CEREVISIAE
    KAWAKAMI, K
    PANDE, S
    FAIOLA, B
    MOORE, DP
    BOEKE, JD
    FARABAUGH, PJ
    STRATHERN, JN
    NAKAMURA, Y
    GARFINKEL, DJ
    GENETICS, 1993, 135 (02) : 309 - 320
  • [7] A Ty1 integrase nuclear localization signal required for retrotransposition
    Moore, SP
    Rinckel, LA
    Garfinkel, DJ
    MOLECULAR AND CELLULAR BIOLOGY, 1998, 18 (02) : 1105 - 1114
  • [8] A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition
    Barkova, Anastasia
    Adhya, Indranil
    Conesa, Christine
    Asif-Laidin, Amna
    Bonnet, Amandine
    Rabut, Elise
    Chagneau, Carine
    Lesage, Pascale
    Acker, Joel
    MOBILE DNA, 2022, 13 (01)
  • [9] A proteomic screen of Ty1 integrase partners identifies the protein kinase CK2 as a regulator of Ty1 retrotransposition
    Anastasia Barkova
    Indranil Adhya
    Christine Conesa
    Amna Asif-Laidin
    Amandine Bonnet
    Elise Rabut
    Carine Chagneau
    Pascale Lesage
    Joël Acker
    Mobile DNA, 13
  • [10] Ty1 retrotransposition and programmed+1 ribosomal frameshifting require the integrity of the protein synthetic translocation step
    Harger, JW
    Meskauskas, A
    Nielsen, J
    Justice, MC
    Dinman, JD
    VIROLOGY, 2001, 286 (01) : 216 - 224