共 17 条
[1]
Aronesty E., 2013, OPEN BIOINFORM J, V7, P1, DOI [10.2174/1875036201307010001, DOI 10.2174/1875036201307010001]
[2]
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
[J].
Bankevich, Anton
;
Nurk, Sergey
;
Antipov, Dmitry
;
Gurevich, Alexey A.
;
Dvorkin, Mikhail
;
Kulikov, Alexander S.
;
Lesin, Valery M.
;
Nikolenko, Sergey I.
;
Son Pham
;
Prjibelski, Andrey D.
;
Pyshkin, Alexey V.
;
Sirotkin, Alexander V.
;
Vyahhi, Nikolay
;
Tesler, Glenn
;
Alekseyev, Max A.
;
Pevzner, Pavel A.
.
JOURNAL OF COMPUTATIONAL BIOLOGY,
2012, 19 (05)
:455-477

Bankevich, Anton
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Nurk, Sergey
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Antipov, Dmitry
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Gurevich, Alexey A.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Dvorkin, Mikhail
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Kulikov, Alexander S.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia
VA Steklov Math Inst, St Petersburg 191011, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Lesin, Valery M.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Nikolenko, Sergey I.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia
VA Steklov Math Inst, St Petersburg 191011, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Son Pham
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Comp Sci & Engn, La Jolla, CA 92093 USA Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Prjibelski, Andrey D.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Pyshkin, Alexey V.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Sirotkin, Alexander V.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Vyahhi, Nikolay
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Tesler, Glenn
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif San Diego, Dept Math, La Jolla, CA 92093 USA Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Alekseyev, Max A.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA

Pevzner, Pavel A.
论文数: 0 引用数: 0
h-index: 0
机构:
St Petersburg Acad Univ, Russian Acad Sci, Algorithm Biol Lab, St Petersburg, Russia
Univ Calif San Diego, Dept Comp Sci & Engn, La Jolla, CA 92093 USA Univ S Carolina, Dept Comp Sci & Engn, Columbia, SC 29208 USA
[3]
Boutet E, 2016, METHODS MOL BIOL, V1374, P23, DOI 10.1007/978-1-4939-3167-5_2
[4]
Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverage
[J].
Chakraborty, Mahul
;
Baldwin-Brown, James G.
;
Long, Anthony D.
;
Emerson, J. J.
.
NUCLEIC ACIDS RESEARCH,
2016, 44 (19)

Chakraborty, Mahul
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA

Baldwin-Brown, James G.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA

Long, Anthony D.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA
Univ Calif Irvine, Ctr Complex Biol Syst, Irvine, CA 92697 USA Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA

Emerson, J. J.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA
Univ Calif Irvine, Ctr Complex Biol Syst, Irvine, CA 92697 USA Univ Calif Irvine, Dept Ecol & Evolutionary Biol, Irvine, CA 92697 USA
[5]
Comparative analysis of the predicted secretomes of Rosaceae scab pathogens Venturia inaequalis and V. pirina reveals expanded effector families and putative determinants of host range
[J].
Deng, Cecilia H.
;
Plummer, Kim M.
;
Jones, Darcy A. B.
;
Mesarich, Carl H.
;
Shiller, Jason
;
Taranto, Adam P.
;
Robinson, Andrew J.
;
Kastner, Patrick
;
Hall, Nathan E.
;
Templeton, Matthew D.
;
Bowen, Joanna K.
.
BMC GENOMICS,
2017, 18

Deng, Cecilia H.
论文数: 0 引用数: 0
h-index: 0
机构:
New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

Plummer, Kim M.
论文数: 0 引用数: 0
h-index: 0
机构:
La Trobe Univ, AgriBio Ctr AgriBiosci, Anim Plant & Soil Sci Dept, Melbourne, Vic, Australia
Plant Biosecur Cooperat Res Ctr, Bruce, ACT, Australia New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

论文数: 引用数:
h-index:
机构:

Mesarich, Carl H.
论文数: 0 引用数: 0
h-index: 0
机构:
New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand
Univ Auckland, Sch Biol Sci, Auckland, New Zealand
Massey Univ, Inst Agr & Environm, Palmerston North, New Zealand New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

Shiller, Jason
论文数: 0 引用数: 0
h-index: 0
机构:
La Trobe Univ, AgriBio Ctr AgriBiosci, Anim Plant & Soil Sci Dept, Melbourne, Vic, Australia
INRA Angers, Beaucouze, France New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

Taranto, Adam P.
论文数: 0 引用数: 0
h-index: 0
机构:
La Trobe Univ, AgriBio Ctr AgriBiosci, Anim Plant & Soil Sci Dept, Melbourne, Vic, Australia
Australian Natl Univ, Res Sch Biol, Plant Sci Div, Canberra, ACT, Australia New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

Robinson, Andrew J.
论文数: 0 引用数: 0
h-index: 0
机构:
La Trobe Univ, AgriBio Ctr AgriBiosci, Anim Plant & Soil Sci Dept, Melbourne, Vic, Australia
Victorian Life Sci Computat Initiat VLSCI, Life Sci Computat Ctr, Carlton, Vic, Australia New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

论文数: 引用数:
h-index:
机构:

Hall, Nathan E.
论文数: 0 引用数: 0
h-index: 0
机构:
La Trobe Univ, AgriBio Ctr AgriBiosci, Anim Plant & Soil Sci Dept, Melbourne, Vic, Australia
Victorian Life Sci Computat Initiat VLSCI, Life Sci Computat Ctr, Carlton, Vic, Australia New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

Templeton, Matthew D.
论文数: 0 引用数: 0
h-index: 0
机构:
New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand
Univ Auckland, Sch Biol Sci, Auckland, New Zealand New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand

Bowen, Joanna K.
论文数: 0 引用数: 0
h-index: 0
机构:
New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand New Zealand Inst Plant & Food Res Ltd PFR, Auckland, New Zealand
[6]
STAR: ultrafast universal RNA-seq aligner
[J].
Dobin, Alexander
;
Davis, Carrie A.
;
Schlesinger, Felix
;
Drenkow, Jorg
;
Zaleski, Chris
;
Jha, Sonali
;
Batut, Philippe
;
Chaisson, Mark
;
Gingeras, Thomas R.
.
BIOINFORMATICS,
2013, 29 (01)
:15-21

Dobin, Alexander
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Davis, Carrie A.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Schlesinger, Felix
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Drenkow, Jorg
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Zaleski, Chris
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Jha, Sonali
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Batut, Philippe
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Chaisson, Mark
论文数: 0 引用数: 0
h-index: 0
机构:
Pacific Biosci, Menlo Pk, CA USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA

Gingeras, Thomas R.
论文数: 0 引用数: 0
h-index: 0
机构:
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
[7]
BRAKER1: Unsupervised RNA-Seq-Based Genome Annotation with GeneMark-ET and AUGUSTUS
[J].
Hoff, Katharina J.
;
Lange, Simone
;
Lomsadze, Alexandre
;
Borodovsky, Mark
;
Stanke, Mario
.
BIOINFORMATICS,
2016, 32 (05)
:767-769

Hoff, Katharina J.
论文数: 0 引用数: 0
h-index: 0
机构:
Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany

Lange, Simone
论文数: 0 引用数: 0
h-index: 0
机构:
Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany

Lomsadze, Alexandre
论文数: 0 引用数: 0
h-index: 0
机构:
Joint Georgia Tech & Emory Univ, Wallace H Coulter Dept Biomed Engn, Atlanta, GA 30332 USA Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany

Borodovsky, Mark
论文数: 0 引用数: 0
h-index: 0
机构:
Sch Computat Sci & Engn, Atlanta, GA 30332 USA
Joint Georgia Tech & Emory Univ, Wallace H Coulter Dept Biomed Engn, Atlanta, GA 30332 USA
Moscow Inst Phys & Technol, Dolgoprudnyi, Moscow Region, Russia Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany

Stanke, Mario
论文数: 0 引用数: 0
h-index: 0
机构:
Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany Ernst Moritz Arndt Univ Greifswald, Inst Math & Comp Sci, D-17487 Greifswald, Germany
[8]
InterProScan 5: genome-scale protein function classification
[J].
Jones, Philip
;
Binns, David
;
Chang, Hsin-Yu
;
Fraser, Matthew
;
Li, Weizhong
;
McAnulla, Craig
;
McWilliam, Hamish
;
Maslen, John
;
Mitchell, Alex
;
Nuka, Gift
;
Pesseat, Sebastien
;
Quinn, Antony F.
;
Sangrador-Vegas, Amaia
;
Scheremetjew, Maxim
;
Yong, Siew-Yit
;
Lopez, Rodrigo
;
Hunter, Sarah
.
BIOINFORMATICS,
2014, 30 (09)
:1236-1240

Jones, Philip
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England
Wellcome Trust Sanger Inst, Hinxton CB10 1SA, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

Binns, David
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

Chang, Hsin-Yu
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

论文数: 引用数:
h-index:
机构:

Li, Weizhong
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

McAnulla, Craig
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

McWilliam, Hamish
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

Maslen, John
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England
Wellcome Trust Sanger Inst, Hinxton CB10 1SA, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

论文数: 引用数:
h-index:
机构:

Nuka, Gift
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

论文数: 引用数:
h-index:
机构:

Quinn, Antony F.
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

Sangrador-Vegas, Amaia
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

论文数: 引用数:
h-index:
机构:

Yong, Siew-Yit
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

Lopez, Rodrigo
论文数: 0 引用数: 0
h-index: 0
机构:
European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England European Bioinformat Inst EMBL EBI, European Mol Biol Lab, Hinxton CB10 1SD, England

论文数: 引用数:
h-index:
机构:
[9]
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
[J].
Koren, Sergey
;
Walenz, Brian P.
;
Berlin, Konstantin
;
Miller, Jason R.
;
Bergman, Nicholas H.
;
Phillippy, Adam M.
.
GENOME RESEARCH,
2017, 27 (05)
:722-736

Koren, Sergey
论文数: 0 引用数: 0
h-index: 0
机构:
NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA

Walenz, Brian P.
论文数: 0 引用数: 0
h-index: 0
机构:
NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA

Berlin, Konstantin
论文数: 0 引用数: 0
h-index: 0
机构:
Invincea Inc, Fairfax, VA 22030 USA NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA

Miller, Jason R.
论文数: 0 引用数: 0
h-index: 0
机构:
J Craig Venter Inst, Rockville, MD 20850 USA NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA

Bergman, Nicholas H.
论文数: 0 引用数: 0
h-index: 0
机构:
Natl Biodefense Anal & Countermeasures Ctr, Frederick, MD 21702 USA NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA

Phillippy, Adam M.
论文数: 0 引用数: 0
h-index: 0
机构:
NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA NHGRI, Genome Informat Sect, Computat & Stat Genom Branch, NIH, Bethesda, MD 20892 USA
[10]
MacHardy W.E., 1996, APPLE SCAB BIOL EPID