Two Draft Genome Sequences of a New Serovar of Salmonella enterica, Serovar Lubbock

被引：8

作者：

Bugarel, Marie ^{[1
]}

den Bakker, Henk C. ^{[1
]}

Nightingale, Kendra K. ^{[1
]}

Brichta-Harhay, Dayna M. ^{[2
]}

Edrington, Thomas S. ^{[3
]}

Loneragan, Guy H. ^{[1
]}

机构：

[1] Texas Tech Univ, Dept Anim & Food Sci, Int Ctr Food Ind Excellence, Lubbock, TX 79409 USA

[2] ARS, USDA, Roman L Hruska US Meat Anim Res Ctr, Clay Ctr, NE USA

[3] ARS, USDA, Southern Plains Agr Res Ctr, Food & Feed Safety Res Unit, College Stn, TX USA

来源：

GENOME ANNOUNCEMENTS | 2015年 / 3卷 / 02期

关键词：

D O I：

10.1128/genomeA.00215-15

中图分类号：

学科分类号：

摘要：

Salmonella enterica is principally a foodborne pathogen that shows considerable serovar diversity. In this report, we present two draft genome sequences of Salmonella enterica subsp. enterica serovar Lubbock, a novel serovar.

引用

页数：2

共 13 条

[1] Multilocus Sequence Typing as a Replacement for Serotyping in Salmonella enterica [J].

Achtman, Mark ;

Wain, John ;

Weill, Francois-Xavier ;

Nair, Satheesh ;

Zhou, Zhemin ;

Sangal, Vartul ;

Krauland, Mary G. ;

Hale, James L. ;

Harbottle, Heather ;

Uesbeck, Alexandra ;

Dougan, Gordon ;

Harrison, Lee H. ;

Brisse, Sylvain .

PLOS PATHOGENS, 2012, 8 (06)

[2] BASIC LOCAL ALIGNMENT SEARCH TOOL [J].

ALTSCHUL, SF ;

GISH, W ;

MILLER, W ;

MYERS, EW ;

LIPMAN, DJ .

JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410

[3] Toward an online repository of Standard Operating Procedures (SOPs) for (Meta) genomic annotation [J].

Angiuoli, Samuel V. ;

Gussman, Aaron ;

Klimke, William ;

Cochrane, Guy ;

Field, Dawn ;

Garrity, George ;

Kodira, Chinnappa D. ;

Kyrpides, Nikos ;

Madupu, Ramana ;

Markowitz, Victor ;

Tatusova, Tatiana ;

Thomson, Nick ;

White, Owen .

OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY, 2008, 12 (02) :137-141

[4] Rapid Whole-Genome Sequencing for Surveillance of Salmonella enterica Serovar Enteritidis [J].

den Bakker, Henk C. ;

Allard, Marc W. ;

Bopp, Dianna ;

Brown, Eric W. ;

Fontana, John ;

Iqbal, Zamin ;

Kinney, Aristea ;

Limberger, Ronald ;

Musser, Kimberlee A. ;

Shudt, Matthew ;

Strain, Errol ;

Wiedmann, Martin ;

Wolfgang, William J. .

EMERGING INFECTIOUS DISEASES, 2014, 20 (08) :1306-1314

[5] Genome sequencing reveals diversification of virulence factor content and possible host adaptation in distinct subpopulations of Salmonella enterica [J].

den Bakker, Henk C. ;

Switt, Andrea I. Moreno ;

Govoni, Gregory ;

Cummings, Craig A. ;

Ranieri, Matthew L. ;

Degoricija, Lovorka ;

Hoelzer, Karin ;

Rodriguez-Rivera, Lorraine D. ;

Brown, Stephanie ;

Bolchacova, Elena ;

Furtado, Manohar R. ;

Wiedmann, Martin .

BMC GENOMICS, 2011, 12

[6] When Whole-Genome Alignments Just Won't Work: kSNP v2 Software for Alignment-Free SNP Discovery and Phylogenetics of Hundreds of Microbial Genomes [J].

Gardner, Shea N. ;

Hall, Barry G. .

PLOS ONE, 2013, 8 (12)

[7] Substantial within-Animal Diversity of Salmonella Isolates from Lymph Nodes, Feces, and Hides of Cattle at Slaughter [J].

Gragg, Sara E. ;

Loneragan, Guy H. ;

Nightingale, Kendra K. ;

Brichta-Harhay, Dayna M. ;

Ruiz, Henry ;

Elder, Jacob R. ;

Garcia, Lyda G. ;

Miller, Markus F. ;

Echeverry, Alejandro ;

Ramirez Porras, Rosa G. ;

Brashears, Mindy M. .

APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2013, 79 (15) :4744-4750

[8] Cross-sectional Study Examining Salmonella enterica Carriage in Subiliac Lymph Nodes of Cull and Feedlot Cattle at Harvest [J].

Gragg, Sara E. ;

Loneragan, Guy H. ;

Brashears, Mindy M. ;

Arthur, Terrance M. ;

Bosilevac, Joseph M. ;

Kalchayanand, Norasak ;

Wang, Rong ;

Schmidt, John W. ;

Brooks, J. Chance ;

Shackelford, Steven D. ;

Wheeler, Tommy L. ;

Brown, Tyson R. ;

Edrington, Thomas S. ;

Brichta-Harhay, Dayna M. .

FOODBORNE PATHOGENS AND DISEASE, 2013, 10 (04) :368-374

[9]

Grimont PA, 2007, ANTIGENIC FORMULAE S

[10] Supplement 2003-2007 (No. 47) to the White-Kauffmann-Le Minor scheme [J].

Guibourdenche, Martine ;

Roggentin, Peter ;

Mikoleit, Matthew ;

Fields, Patricia I. ;

Bockemuehl, Jochen ;

Grimont, Patrick A. D. ;

Weill, Francois-Xavier .

RESEARCH IN MICROBIOLOGY, 2010, 161 (01) :26-29

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