Spectroscopic data for the G-quadruplex DNA to duplex DNA reaction

被引:0
|
作者
Mendoza, Oscar [1 ,2 ]
Elezgaray, Juan [1 ,3 ]
Mergny, Jean-Louis [1 ,2 ]
机构
[1] Univ Bordeaux, F-33600 Bordeaux, France
[2] INSERM, ARNA Lab, IECB, U869, F-33600 Pessac, France
[3] CNRS, CBMN, UMR5248, F-33600 Pessac, France
来源
DATA IN BRIEF | 2015年 / 5卷
关键词
D O I
10.1016/j.dib.2015.10.039
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
This article describes additional data related to a research article entitled "Kinetics of Quadruplex to Duplex Conversion" (Mendoza et al. 2015 [1]). We followed the opening reaction of a series of intramolecular G-quadruplex structures by the addition of their corresponding complementary strand. Fluorolabeled complementary strands allowed to monitor the reaction in real-time. An adapted kinetic model was then applied in order to obtain the kinetic parameters of this reaction. We present a series of kinetic traces providing raw data of the G4 opening reaction and the fitting model applied in every case. In addition CD spectra and UV melting data is also provided to confirm the stability of all the DNA structures considered (G-quadruplex and duplex DNA). (C) 2015 The Authors. Published by Elsevier Inc.
引用
收藏
页码:822 / 828
页数:7
相关论文
共 50 条
  • [21] G-quadruplex DNA: myth or reality?
    Riou, JF
    Gomez, D
    Lemarteleur, T
    Trentesaux, C
    BULLETIN DU CANCER, 2003, 90 (04) : 305 - 313
  • [22] Mapping DNA G-quadruplex structures
    Eytan Zlotorynski
    Nature Reviews Molecular Cell Biology, 2015, 16 (9) : 518 - 518
  • [23] A G-quadruplex ligand with 10000-fold selectivity over duplex DNA
    Dixon, Isabelle M.
    Lopez, Frederic
    Tejera, Agueda M.
    Esteve, Jean-Pierre
    Blasco, Maria A.
    Pratviel, Genevieve
    Meunier, Bernard
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (06) : 1502 - +
  • [24] Responsive DNA G-quadruplex micelles
    Cozzoli, Liliana
    Gjonaj, Lorina
    Stuart, Marc C. A.
    Poolman, Bert
    Roelfes, Gerard
    CHEMICAL COMMUNICATIONS, 2018, 54 (03) : 260 - 263
  • [25] Simultaneous G-Quadruplex DNA Logic
    Bader, Antoine
    Cockroft, Scott L.
    CHEMISTRY-A EUROPEAN JOURNAL, 2018, 24 (19) : 4820 - 4824
  • [26] New G-quadruplex DNA structures
    Shivachev, Boris L.
    Dimowa, Louiza T.
    Nikolova, Rosica P.
    Sbirkova, Hristina I.
    Tzvetanova, Lilia
    Hristoff, Peter
    Radoslavov, Georgi
    Tzanko, Doukov I.
    ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES, 2015, 71 : S247 - S247
  • [27] Targeting G-quadruplex DNA and B-DNA with a natural alkaloid: a comparative spectroscopic study
    Mandal, Paulami
    Bhattacharya, Maitree
    Chowdhury, Joydeep
    RSC ADVANCES, 2016, 6 (111) : 109846 - 109856
  • [28] A pyridyl carboxamide molecule selectively stabilizes DNA G-quadruplex and regulates duplex-quadruplex competition
    Xu, Liang
    Wu, Weixin
    Ding, Jie
    Feng, Shuo
    Xing, Xiwen
    Deng, Minggang
    Zhou, Xiang
    RSC ADVANCES, 2012, 2 (03): : 894 - 899
  • [29] Discovering New G-Quadruplex DNA Catalysts in Enantioselective Sulfoxidation Reaction
    Festa, Carmen
    Esposito, Veronica
    Benigno, Daniela
    De Marino, Simona
    Zampella, Angela
    Virgilio, Antonella
    Galeone, Aldo
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 23 (03)
  • [30] Alkylating probes for the G-quadruplex structure and evaluation of the properties of the alkylated G-quadruplex DNA
    Sato, Norihiro
    Takahashi, Shuntaro
    Tateishi-Karimata, Hisae
    Hazemi, Madoka E.
    Chikuni, Tomoko
    Onizuka, Kazumitsu
    Sugimoto, Naoki
    Nagatsugi, Fumi
    ORGANIC & BIOMOLECULAR CHEMISTRY, 2018, 16 (09) : 1436 - 1441