Identification of a Novel Single-Stranded Circular DNA Virus in Pig Feces

被引:10
作者
Cheung, Andrew K. [1 ]
Ng, Terry Fei Fan [3 ,4 ]
Lager, Kelly M. [1 ]
Alt, David P. [2 ]
Delwart, Eric L. [3 ,4 ]
Pogranichniy, Roman M. [5 ,6 ]
机构
[1] ARS, Virus & Prion Dis Res Unit, Natl Anim Dis Ctr, USDA, Ames, IA 50011 USA
[2] ARS, Infect Bacterial Dis Res Unit, Natl Anim Dis Ctr, USDA, Ames, IA 50011 USA
[3] Univ Calif San Francisco, Blood Syst Res Inst, San Francisco, CA 94143 USA
[4] Univ Calif San Francisco, Dept Lab Med, San Francisco, CA 94143 USA
[5] Purdue Univ, Indiana Anim Dis Diagnost Lab, W Lafayette, IN 47907 USA
[6] Purdue Univ, Dept Comparat Pathobiol, W Lafayette, IN 47907 USA
关键词
D O I
10.1128/genomeA.00347-14
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学科分类号
摘要
Porcine stool-associated circular virus 5 (PoSCV5) was detected in the feces of a pig with diarrhea. The complete 3,062-nucleotide genome contains two bidirectionally transcribed open reading frames (ORFs). Phylogenetic analysis of the deduced replication initiator protein (Rep) places PoSCV5 alone on a deep branch among the small circular Rep-encoding single-stranded DNA viruses.
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页数:1
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共 5 条
[1]   A divergent clade of circular single-stranded DNA viruses from pig feces [J].
Cheung, Andrew K. ;
Ng, Terry F. ;
Lager, Kelly M. ;
Bayles, Darrell O. ;
Alt, David P. ;
Delwart, Eric L. ;
Pogranichniy, Roman M. ;
Kehrli, Marcus E., Jr. .
ARCHIVES OF VIROLOGY, 2013, 158 (10) :2157-2162
[2]   Rapidly expanding genetic diversity and host range of the Circoviridae viral family and other Rep encoding small circular ssDNA genomes [J].
Delwart, Eric ;
Li, Linlin .
VIRUS RESEARCH, 2012, 164 (1-2) :114-121
[3]   Previously unknown and highly divergent ssDNA viruses populate the oceans [J].
Labonte, Jessica M. ;
Suttle, Curtis A. .
ISME JOURNAL, 2013, 7 (11) :2169-2177
[4]   The Fecal Viral Flora of Wild Rodents [J].
Phan, Tung G. ;
Kapusinszky, Beatrix ;
Wang, Chunlin ;
Rose, Robert K. ;
Lipton, Howard L. ;
Delwart, Eric L. .
PLOS PATHOGENS, 2011, 7 (09)
[5]   A field guide to eukaryotic circular single-stranded DNA viruses: insights gained from metagenomics [J].
Rosario, Karyna ;
Duffy, Siobain ;
Breitbart, Mya .
ARCHIVES OF VIROLOGY, 2012, 157 (10) :1851-1871