Next-Generation DNA Sequencing Technologies

被引:2
作者
Kurekci, Gulsum Kayman [1 ]
Dincer, Pervin [1 ]
机构
[1] Hacettepe Univ, Fac Med, Dept Med Biol, Ankara, Turkey
关键词
Genome; next-generation sequencing; high-throughput sequencing;
D O I
10.5152/etd.2014.7803
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Recently, the requirement for fast, low-cost, and highly reliable methods has triggered the development of next-generation DNA sequencing technologies. In addition to overcoming the restrictions in Sanger sequencing methods, large-scale genetic data have provided the development of different analysis methods. In this paper, widely used next-generation sequencing platforms, the analyses of the data obtained, and the applications of these technologies are discussed.
引用
收藏
页码:99 / 103
页数:5
相关论文
共 39 条
[1]   Exome sequencing as a tool for Mendelian disease gene discovery [J].
Bamshad, Michael J. ;
Ng, Sarah B. ;
Bigham, Abigail W. ;
Tabor, Holly K. ;
Emond, Mary J. ;
Nickerson, Deborah A. ;
Shendure, Jay .
NATURE REVIEWS GENETICS, 2011, 12 (11) :745-755
[2]   Our changing view of the genomic landscape of cancer [J].
Bell, Daphne W. .
JOURNAL OF PATHOLOGY, 2010, 220 (02) :231-243
[3]   Accurate whole human genome sequencing using reversible terminator chemistry [J].
Bentley, David R. ;
Balasubramanian, Shankar ;
Swerdlow, Harold P. ;
Smith, Geoffrey P. ;
Milton, John ;
Brown, Clive G. ;
Hall, Kevin P. ;
Evers, Dirk J. ;
Barnes, Colin L. ;
Bignell, Helen R. ;
Boutell, Jonathan M. ;
Bryant, Jason ;
Carter, Richard J. ;
Cheetham, R. Keira ;
Cox, Anthony J. ;
Ellis, Darren J. ;
Flatbush, Michael R. ;
Gormley, Niall A. ;
Humphray, Sean J. ;
Irving, Leslie J. ;
Karbelashvili, Mirian S. ;
Kirk, Scott M. ;
Li, Heng ;
Liu, Xiaohai ;
Maisinger, Klaus S. ;
Murray, Lisa J. ;
Obradovic, Bojan ;
Ost, Tobias ;
Parkinson, Michael L. ;
Pratt, Mark R. ;
Rasolonjatovo, Isabelle M. J. ;
Reed, Mark T. ;
Rigatti, Roberto ;
Rodighiero, Chiara ;
Ross, Mark T. ;
Sabot, Andrea ;
Sankar, Subramanian V. ;
Scally, Aylwyn ;
Schroth, Gary P. ;
Smith, Mark E. ;
Smith, Vincent P. ;
Spiridou, Anastassia ;
Torrance, Peta E. ;
Tzonev, Svilen S. ;
Vermaas, Eric H. ;
Walter, Klaudia ;
Wu, Xiaolin ;
Zhang, Lu ;
Alam, Mohammed D. ;
Anastasi, Carole .
NATURE, 2008, 456 (7218) :53-59
[4]   Whole-genome re-sequencing [J].
Bentley, David R. .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2006, 16 (06) :545-552
[5]   Sequence information can be obtained from single DNA molecules [J].
Braslavsky, I ;
Hebert, B ;
Kartalov, E ;
Quake, SR .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (07) :3960-3964
[6]   Next-generation sequencing approaches for genetic mapping of complex diseases [J].
Casals, Ferran ;
Idaghdour, Youssef ;
Hussin, Julie ;
Awadalla, Philip .
JOURNAL OF NEUROIMMUNOLOGY, 2012, 248 (1-2) :10-22
[7]   Finishing the euchromatic sequence of the human genome [J].
Collins, FS ;
Lander, ES ;
Rogers, J ;
Waterston, RH .
NATURE, 2004, 431 (7011) :931-945
[8]   The Complete Genome Sequence of the Plant Growth-Promoting Bacterium Pseudomonas sp UW4 [J].
Duan, Jin ;
Jiang, Wei ;
Cheng, Zhenyu ;
Heikkila, John J. ;
Glick, Bernard R. .
PLOS ONE, 2013, 8 (03)
[9]   Real-Time DNA Sequencing from Single Polymerase Molecules [J].
Eid, John ;
Fehr, Adrian ;
Gray, Jeremy ;
Luong, Khai ;
Lyle, John ;
Otto, Geoff ;
Peluso, Paul ;
Rank, David ;
Baybayan, Primo ;
Bettman, Brad ;
Bibillo, Arkadiusz ;
Bjornson, Keith ;
Chaudhuri, Bidhan ;
Christians, Frederick ;
Cicero, Ronald ;
Clark, Sonya ;
Dalal, Ravindra ;
deWinter, Alex ;
Dixon, John ;
Foquet, Mathieu ;
Gaertner, Alfred ;
Hardenbol, Paul ;
Heiner, Cheryl ;
Hester, Kevin ;
Holden, David ;
Kearns, Gregory ;
Kong, Xiangxu ;
Kuse, Ronald ;
Lacroix, Yves ;
Lin, Steven ;
Lundquist, Paul ;
Ma, Congcong ;
Marks, Patrick ;
Maxham, Mark ;
Murphy, Devon ;
Park, Insil ;
Pham, Thang ;
Phillips, Michael ;
Roy, Joy ;
Sebra, Robert ;
Shen, Gene ;
Sorenson, Jon ;
Tomaney, Austin ;
Travers, Kevin ;
Trulson, Mark ;
Vieceli, John ;
Wegener, Jeffrey ;
Wu, Dawn ;
Yang, Alicia ;
Zaccarin, Denis .
SCIENCE, 2009, 323 (5910) :133-138
[10]   Solution hybrid selection with ultra-long oligonucleotides for massively parallel targeted sequencing [J].
Gnirke, Andreas ;
Melnikov, Alexandre ;
Maguire, Jared ;
Rogov, Peter ;
LeProust, Emily M. ;
Brockman, William ;
Fennell, Timothy ;
Giannoukos, Georgia ;
Fisher, Sheila ;
Russ, Carsten ;
Gabriel, Stacey ;
Jaffe, David B. ;
Lander, Eric S. ;
Nusbaum, Chad .
NATURE BIOTECHNOLOGY, 2009, 27 (02) :182-189