HIGH-RESOLUTION CYTOGENETIC MAPPING OF THE SHORT ARM OF CHROMOSOME-1 WITH NEWLY ISOLATED 411-COSMID MARKERS BY FLUORESCENCE IN-SITU HYBRIDIZATION - THE PRECISE ORDER OF 18 MARKERS ON 1P36.1 ON PROPHASE CHROMOSOMES AND STRETCHED DNAS

被引:30
作者
ARIYAMA, T
INAZAWA, J
EZAKI, T
NAKAMURA, Y
HORII, A
ABE, T
机构
[1] KYOTO PREFECTURAL UNIV MED,DEPT HYG,KAMIKYO KU,KYOTO 602,JAPAN
[2] JAPANESE FDN CANC RES,INST CANC,DEPT BIOCHEM,TOSHIMA KU,TOKYO 170,JAPAN
[3] KINKI UNIV,SCH MED,DEPT INTERNAL MED,SAYAMA,OSAKA 589,JAPAN
基金
日本科学技术振兴机构;
关键词
D O I
10.1016/0888-7543(95)80116-4
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A high-resolution cytogenetic map of the short arm of chromosome 1 with newly isolated 411 cosmid markers was constructed by fluorescence in situ hybridization (FISH). These markers were scattered throughout chromosome 1p, but they were preferentially concentrated on R-band dominant regions such as 1p36, 1p34, 1p32, 1p22, and 1p13. Among these markers, 197 were localized on chromosome band 1p36, a region frequently deleted in neuroblastoma. Of these, 18 were precisely ordered on 1p36.1 by multicolor FISH of prophase chromosomes and ''stretched'' DNAs as follows: 1pter-163-41-11-1-226-586-568-614-631-665-451-199-190-561-241-74-176-652-1cen. The high-density map of chromosome 1p constructed here can provide useful landmarks for constructing a contig map of the short arm of chromosome 1 with YACs and cosmid clones and will expedite the identification of breakpoints and/or tumor suppressor gene(s) associated with several types of malignant tumors that frequently exhibit chromosomal aberrations or deletions of chromosome 1p. (C) 1995 Academic Press, Inc.
引用
收藏
页码:114 / 123
页数:10
相关论文
共 30 条
[1]   A GENETIC-LINKAGE MAP OF THE HUMAN GENOME [J].
DONISKELLER, H ;
GREEN, P ;
HELMS, C ;
CARTINHOUR, S ;
WEIFFENBACH, B ;
STEPHENS, K ;
KEITH, TP ;
BOWDEN, DW ;
SMITH, DR ;
LANDER, ES ;
BOTSTEIN, D ;
AKOTS, G ;
REDIKER, KS ;
GRAVIUS, T ;
BROWN, VA ;
RISING, MB ;
PARKER, C ;
POWERS, JA ;
WATT, DE ;
KAUFFMAN, ER ;
BRICKER, A ;
PHIPPS, P ;
MULLERKAHLE, H ;
FULTON, TR ;
NG, S ;
SCHUMM, JW ;
BRAMAN, JC ;
KNOWLTON, RG ;
BARKER, DF ;
CROOKS, SM ;
LINCOLN, SE ;
DALY, MJ ;
ABRAHAMSON, J .
CELL, 1987, 51 (02) :319-337
[2]   THE CEPH1 CONSORTIUM LINKAGE MAP OF HUMAN CHROMOSOME-1 [J].
DRACOPOLI, NC ;
OCONNELL, P ;
ELSNER, TI ;
LALOUEL, JM ;
WHITE, RL ;
BUETOW, KH ;
NISHIMURA, DY ;
MURRAY, JC ;
HELMS, C ;
MISHRA, SK ;
DONISKELLER, H ;
HALL, JM ;
LEE, MK ;
KING, MC ;
ATTWOOD, J ;
MORTON, NE ;
ROBSON, EB ;
MAHTANI, M ;
WILLARD, HF ;
ROYLE, NJ ;
PATEL, I ;
JEFFREYS, AJ ;
VERGA, V ;
JENKINS, T ;
WEBER, JL ;
MITCHELL, AL ;
BALE, AE .
GENOMICS, 1991, 9 (04) :686-700
[3]   LOSS OF ALLELES FROM THE DISTAL SHORT ARM OF CHROMOSOME-1 OCCURS LATE IN MELANOMA TUMOR PROGRESSION [J].
DRACOPOLI, NC ;
HARNETT, P ;
BALE, SJ ;
STANGER, BZ ;
TUCKER, MA ;
HOUSMAN, DE ;
KEFFORD, RF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (12) :4614-4618
[4]  
DRACOPOLI NC, 1988, AM J HUM GENET, V43, P462
[5]   LOSS OF HETEROZYGOSITY FOR THE SHORT ARM OF CHROMOSOME-1 IN HUMAN NEUROBLASTOMAS - CORRELATION WITH N-MYC AMPLIFICATION [J].
FONG, CT ;
DRACOPOLI, NC ;
WHITE, PS ;
MERRILL, PT ;
GRIFFITH, RC ;
HOUSMAN, DE ;
BRODEUR, GM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (10) :3753-3757
[6]  
Harnden DG, 1985, INT SYSTEM HUMAN CYT
[7]  
HIRAI M, 1994, IN PRESS GENOMICS
[8]   A HIGH-RESOLUTION CYTOGENETIC MAP OF 168-COSMID DNA MARKERS FOR HUMAN CHROMOSOME-11 [J].
HORI, TA ;
TAKAHASHI, E ;
TANIGAMI, A ;
TOKINO, T ;
NAKAMURA, Y .
GENOMICS, 1992, 13 (01) :129-133
[9]   A SIMPLE G-BANDING TECHNIQUE ADAPTABLE FOR FLUORESCENT IN-SITU HYBRIDIZATION (FISH) AND PHYSICAL ORDERING OF HUMAN RENIN (REN) AND CATHEPSIN-E (CTSE) GENES BY MULTICOLOR FISH [J].
INAZAWA, J ;
AZUMA, T ;
ARIYAMA, T ;
ABE, T .
ACTA HISTOCHEMICA ET CYTOCHEMICA, 1993, 26 (04) :319-324
[10]   HIGH-RESOLUTION ORDERING OF DNA MARKERS BY MULTICOLOR FLUORESCENT IN-SITU HYBRIDIZATION OF PROPHASE CHROMOSOMES [J].
INAZAWA, J ;
ARIYAMA, T ;
TOKINO, T ;
TANIGAMI, A ;
NAKAMURA, Y ;
ABE, T .
CYTOGENETICS AND CELL GENETICS, 1994, 65 (1-2) :130-135