HIGH-RESOLUTION CYTOGENETIC MAPPING OF THE SHORT ARM OF CHROMOSOME-1 WITH NEWLY ISOLATED 411-COSMID MARKERS BY FLUORESCENCE IN-SITU HYBRIDIZATION - THE PRECISE ORDER OF 18 MARKERS ON 1P36.1 ON PROPHASE CHROMOSOMES AND STRETCHED DNAS

被引:30
作者
ARIYAMA, T
INAZAWA, J
EZAKI, T
NAKAMURA, Y
HORII, A
ABE, T
机构
[1] KYOTO PREFECTURAL UNIV MED,DEPT HYG,KAMIKYO KU,KYOTO 602,JAPAN
[2] JAPANESE FDN CANC RES,INST CANC,DEPT BIOCHEM,TOSHIMA KU,TOKYO 170,JAPAN
[3] KINKI UNIV,SCH MED,DEPT INTERNAL MED,SAYAMA,OSAKA 589,JAPAN
基金
日本科学技术振兴机构;
关键词
D O I
10.1016/0888-7543(95)80116-4
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A high-resolution cytogenetic map of the short arm of chromosome 1 with newly isolated 411 cosmid markers was constructed by fluorescence in situ hybridization (FISH). These markers were scattered throughout chromosome 1p, but they were preferentially concentrated on R-band dominant regions such as 1p36, 1p34, 1p32, 1p22, and 1p13. Among these markers, 197 were localized on chromosome band 1p36, a region frequently deleted in neuroblastoma. Of these, 18 were precisely ordered on 1p36.1 by multicolor FISH of prophase chromosomes and ''stretched'' DNAs as follows: 1pter-163-41-11-1-226-586-568-614-631-665-451-199-190-561-241-74-176-652-1cen. The high-density map of chromosome 1p constructed here can provide useful landmarks for constructing a contig map of the short arm of chromosome 1 with YACs and cosmid clones and will expedite the identification of breakpoints and/or tumor suppressor gene(s) associated with several types of malignant tumors that frequently exhibit chromosomal aberrations or deletions of chromosome 1p. (C) 1995 Academic Press, Inc.
引用
收藏
页码:114 / 123
页数:10
相关论文
共 30 条
  • [1] A GENETIC-LINKAGE MAP OF THE HUMAN GENOME
    DONISKELLER, H
    GREEN, P
    HELMS, C
    CARTINHOUR, S
    WEIFFENBACH, B
    STEPHENS, K
    KEITH, TP
    BOWDEN, DW
    SMITH, DR
    LANDER, ES
    BOTSTEIN, D
    AKOTS, G
    REDIKER, KS
    GRAVIUS, T
    BROWN, VA
    RISING, MB
    PARKER, C
    POWERS, JA
    WATT, DE
    KAUFFMAN, ER
    BRICKER, A
    PHIPPS, P
    MULLERKAHLE, H
    FULTON, TR
    NG, S
    SCHUMM, JW
    BRAMAN, JC
    KNOWLTON, RG
    BARKER, DF
    CROOKS, SM
    LINCOLN, SE
    DALY, MJ
    ABRAHAMSON, J
    [J]. CELL, 1987, 51 (02) : 319 - 337
  • [2] THE CEPH1 CONSORTIUM LINKAGE MAP OF HUMAN CHROMOSOME-1
    DRACOPOLI, NC
    OCONNELL, P
    ELSNER, TI
    LALOUEL, JM
    WHITE, RL
    BUETOW, KH
    NISHIMURA, DY
    MURRAY, JC
    HELMS, C
    MISHRA, SK
    DONISKELLER, H
    HALL, JM
    LEE, MK
    KING, MC
    ATTWOOD, J
    MORTON, NE
    ROBSON, EB
    MAHTANI, M
    WILLARD, HF
    ROYLE, NJ
    PATEL, I
    JEFFREYS, AJ
    VERGA, V
    JENKINS, T
    WEBER, JL
    MITCHELL, AL
    BALE, AE
    [J]. GENOMICS, 1991, 9 (04) : 686 - 700
  • [3] LOSS OF ALLELES FROM THE DISTAL SHORT ARM OF CHROMOSOME-1 OCCURS LATE IN MELANOMA TUMOR PROGRESSION
    DRACOPOLI, NC
    HARNETT, P
    BALE, SJ
    STANGER, BZ
    TUCKER, MA
    HOUSMAN, DE
    KEFFORD, RF
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (12) : 4614 - 4618
  • [4] DRACOPOLI NC, 1988, AM J HUM GENET, V43, P462
  • [5] LOSS OF HETEROZYGOSITY FOR THE SHORT ARM OF CHROMOSOME-1 IN HUMAN NEUROBLASTOMAS - CORRELATION WITH N-MYC AMPLIFICATION
    FONG, CT
    DRACOPOLI, NC
    WHITE, PS
    MERRILL, PT
    GRIFFITH, RC
    HOUSMAN, DE
    BRODEUR, GM
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (10) : 3753 - 3757
  • [6] Harnden DG, 1985, INT SYSTEM HUMAN CYT
  • [7] HIRAI M, 1994, IN PRESS GENOMICS
  • [8] A HIGH-RESOLUTION CYTOGENETIC MAP OF 168-COSMID DNA MARKERS FOR HUMAN CHROMOSOME-11
    HORI, TA
    TAKAHASHI, E
    TANIGAMI, A
    TOKINO, T
    NAKAMURA, Y
    [J]. GENOMICS, 1992, 13 (01) : 129 - 133
  • [9] A SIMPLE G-BANDING TECHNIQUE ADAPTABLE FOR FLUORESCENT IN-SITU HYBRIDIZATION (FISH) AND PHYSICAL ORDERING OF HUMAN RENIN (REN) AND CATHEPSIN-E (CTSE) GENES BY MULTICOLOR FISH
    INAZAWA, J
    AZUMA, T
    ARIYAMA, T
    ABE, T
    [J]. ACTA HISTOCHEMICA ET CYTOCHEMICA, 1993, 26 (04) : 319 - 324
  • [10] HIGH-RESOLUTION ORDERING OF DNA MARKERS BY MULTICOLOR FLUORESCENT IN-SITU HYBRIDIZATION OF PROPHASE CHROMOSOMES
    INAZAWA, J
    ARIYAMA, T
    TOKINO, T
    TANIGAMI, A
    NAKAMURA, Y
    ABE, T
    [J]. CYTOGENETICS AND CELL GENETICS, 1994, 65 (1-2): : 130 - 135