NMR DETERMINATION OF RESIDUAL STRUCTURE IN A UREA-DENATURED PROTEIN, THE 434-REPRESSOR

被引:481
作者
NERI, D [1 ]
BILLETER, M [1 ]
WIDER, G [1 ]
WUTHRICH, K [1 ]
机构
[1] SWISS FED INST TECHNOL,INST MOLEK BIOL & BIOPHYS,CH-8092 ZURICH,SWITZERLAND
关键词
D O I
10.1126/science.1523410
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A nuclear magnetic resonance (NMR) structure determination is reported for the polypeptide chain of a globular protein in strongly denaturing solution. Nuclear Overhauser effect (NOE) measurements with a 7 molar urea solution of the amino-terminal 63-residue domain of the 434-repressor and distance geometry calculations showed that the polypeptide segment 54 to 59 forms a hydrophobic cluster containing the side chains of Val54, Val56, Trp58, and Leu59. This residual structure in the urea-unfolded protein is related to the corresponding region of the native, folded protein by simple rearrangements of the residues 58 to 60. Based on these observations a model for the early phase of refolding of the 434-repressor(1-63) is proposed.
引用
收藏
页码:1559 / 1563
页数:5
相关论文
共 28 条
[1]   COCRYSTALS OF THE DNA-BINDING DOMAIN OF PHAGE-434 REPRESSOR AND A SYNTHETIC PHAGE 434 OPERATOR [J].
ANDERSON, J ;
PTASHNE, M ;
HARRISON, SC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (05) :1307-1311
[2]   RESTRAINED ENERGY REFINEMENT WITH 2 DIFFERENT ALGORITHMS AND FORCE-FIELDS OF THE STRUCTURE OF THE ALPHA-AMYLASE INHIBITOR TENDAMISTAT DETERMINED BY NMR IN SOLUTION [J].
BILLETER, M ;
SCHAUMANN, T ;
BRAUN, W ;
WUTHRICH, K .
BIOPOLYMERS, 1990, 29 (4-5) :695-706
[3]   COMBINED USE OF PROTON-PROTON OVERHAUSER ENHANCEMENTS AND A DISTANCE GEOMETRY ALGORITHM FOR DETERMINATION OF POLYPEPTIDE CONFORMATIONS - APPLICATION TO MICELLE-BOUND GLUCAGON [J].
BRAUN, W ;
BOSCH, C ;
BROWN, LR ;
GO, N ;
WUTHRICH, K .
BIOCHIMICA ET BIOPHYSICA ACTA, 1981, 667 (02) :377-396
[4]   H-1-NMR PARAMETERS OF THE COMMON AMINO-ACID RESIDUES MEASURED IN AQUEOUS-SOLUTIONS OF THE LINEAR TETRAPEPTIDES H-GLY-GLY-X-L-ALA-OH [J].
BUNDI, A ;
WUTHRICH, K .
BIOPOLYMERS, 1979, 18 (02) :285-297
[5]   ORIGINS OF STRUCTURE IN GLOBULAR-PROTEINS [J].
CHAN, HS ;
DILL, KA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (16) :6388-6392
[6]   Characterization of protein folding intermediates [J].
Dobson, Christopher M. .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1991, 1 (01) :22-27
[7]   ISOTOPE-EDITED NMR-SPECTROSCOPY [J].
FESIK, SW .
NATURE, 1988, 332 (6167) :865-866
[8]   PROTON-DETECTED HETERONUCLEAR EDITED AND CORRELATED NUCLEAR-MAGNETIC-RESONANCE AND NUCLEAR OVERHAUSER EFFECT IN SOLUTION [J].
GRIFFEY, RH ;
REDFIELD, AG .
QUARTERLY REVIEWS OF BIOPHYSICS, 1987, 19 (1-2) :51-82
[9]   EFFICIENT COMPUTATION OF 3-DIMENSIONAL PROTEIN STRUCTURES IN SOLUTION FROM NUCLEAR-MAGNETIC-RESONANCE DATA USING THE PROGRAM DIANA AND THE SUPPORTING PROGRAMS CALIBA, HABAS AND GLOMSA [J].
GUNTERT, P ;
BRAUN, W ;
WUTHRICH, K .
JOURNAL OF MOLECULAR BIOLOGY, 1991, 217 (03) :517-530
[10]   STRUCTURE OF THE AMINO-TERMINAL DOMAIN OF PHAGE-434 REPRESSOR AT 2.0 A RESOLUTION [J].
MONDRAGON, A ;
SUBBIAH, S ;
ALMO, SC ;
DROTTAR, M ;
HARRISON, SC .
JOURNAL OF MOLECULAR BIOLOGY, 1989, 205 (01) :189-200